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Nucleic Acids Research|May 17, 2017
Quantitative specificity of STAT1 and several variantsBasab Roy, Zheng Zuo, Gary D StormoScience Advances|November 22, 2017
Measuring quantitative effects of methylation on transcription factor-DNA binding affinityZheng Zuo, Basab Roy, Yiming Kenny Chang, et al.Genetics|September 12, 2014
High-resolution specificity from DNA sequencing highlights alternative modes of Lac repressor bindingZheng Zuo, Gary D StormoQuantitative Biology (Beijing, China)|January 12, 2016
A quantitative understanding of lac repressor's binding specificity and flexibilityZheng Zuo, Yiming Chang, Gary D StormoBMC Molecular Biology|March 29, 2018
Quantitative profiling of BATF family proteins/JUNB/IRF hetero-trimers using Spec-seqYiming K Chang, Zheng Zuo, Gary D StormoBriefings in Functional Genomics|November 2, 2014
Spec-seq: determining protein-DNA-binding specificity by sequencingGary D Stormo, Zheng Zuo, Yiming Kenny ChangCommunications Biology|December 14, 2020
Autoregulation of yeast ribosomal proteins discovered by efficient search for feedback regulationBasab Roy, David Granas, Fredrick Bragg, et al.Current Protocols in Bioinformatics|April 23, 2008
An overview of RNA structure prediction and applications to RNA gene prediction and RNAi designGary D StormoCurrent Protocols in Bioinformatics|August 14, 2015
An Overview of RNA Sequence Analyses: Structure Prediction, ncRNA Gene Identification, and RNAi DesignGary D StormoPageof 20