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Cancer Cell|October 31, 2025
Fusobacterium, quiescent niches, and therapy response in colorectal cancerBassel Ghaddar, Subhajyoti De, Martin J Blaser
Nature Computational Science|November 10, 2023
Denoising sparse microbial signals from single-cell sequencing of mammalian host tissuesBassel Ghaddar, Martin J Blaser, Subhajyoti De
Cancer Cell|February 6, 2026
Reliable detection of Host-Microbe Signatures in cancer using PRISMBassel Ghaddar, Martin J Blaser, Subhajyoti De
Nucleic Acids Research|May 10, 2022
Reconstructing physical cell interaction networks from single-cell data using Neighbor-seqBassel Ghaddar, Subhajyoti De
Bioinformatics (Oxford, England)|November 27, 2023
Hierarchical and automated cell-type annotation and inference of cancer cell of origin with CensusBassel Ghaddar, Subhajyoti De
Cancer Cell|October 11, 2022
Tumor microbiome links cellular programs and immunity in pancreatic cancerBassel Ghaddar, Antara Biswas, Chris Harris, et al.
Computational and Systems Oncology|August 29, 2022
Inference on spatial heterogeneity in tumor microenvironment using spatial transcriptomics dataAntara Biswas, Bassel Ghaddar, Gregory Riedlinger, et al.
Biorxiv : the Preprint Server for Biology|February 3, 2025
Revisiting the cancer microbiome using PRISMBassel C Ghaddar, Martin J Blaser, Subhajyoti De
Frontiers in Genetics|November 1, 2021
Signatures Beyond Oncogenic Mutations in Cell-Free DNA Sequencing for Non-Invasive, Early Detection of CancerSubhajyoti De
Trends in Genetics : TIG|April 19, 2011
Somatic mosaicism in healthy human tissuesSubhajyoti De
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