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Plos One|August 7, 2019
EdgeScaping: Mapping the spatial distribution of pairwise gene expression intensitiesBenafsh Husain, F Alex FeltusScientific Reports|October 14, 2020
Exploration into biomarker potential of region-specific brain gene co-expression networksYuqing Hang, Mohammed Aburidi, Benafsh Husain, et al.G3 (Bethesda, Md.)|July 16, 2020
NetExtractor: Extracting a Cerebellar Tissue Gene Regulatory Network Using Differentially Expressed High Mutual Information Binary RNA ProfilesBenafsh Husain, Allison R Hickman, Yuqing Hang, et al.Patterns (New York, N.Y.)|November 18, 2020
Cellular State Transformations Using Deep Learning for Precision Medicine ApplicationsColin Targonski, M Reed Bender, Benjamin T Shealy, et al.Plant Science : an International Journal of Experimental Plant Biology|April 29, 2014
Systems genetics: a paradigm to improve discovery of candidate genes and mechanisms underlying complex traitsF Alex FeltusG3 (Bethesda, Md.)|February 17, 2022
EdgeCrafting: mining embedded, latent, nonlinear patterns to construct gene relationship networksBenafsh Husain, Matthew Reed Bender, Frank Alex FeltusPlant Physiology|May 25, 2011
Gene coexpression network alignment and conservation of gene modules between two grass species: maize and riceStephen P Ficklin, F Alex FeltusBMC Genomics|April 19, 2011
Assessing pooled BAC and whole genome shotgun strategies for assembly of complex genomesNiina Haiminen, F Alex Feltus, Laxmi ParidaPlant Physiology|July 30, 2010
The association of multiple interacting genes with specific phenotypes in rice using gene coexpression networksStephen P Ficklin, Feng Luo, F Alex FeltusBriefings in Bioinformatics|March 11, 2025
GEMDiff: a diffusion workflow bridges between normal and tumor gene expression states: a breast cancer case studyXusheng Ai, Melissa C Smith, F Alex FeltusPageof 6