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Science (New York, N.Y.)|October 20, 2018
Realizing private and practical pharmacological collaborationBrian Hie, Hyunghoon Cho, Bonnie BergerProceedings. IEEE Computational Systems Bioinformatics Conference|February 2, 2006
A tree-decomposition approach to protein structure predictionJinbo Xu, Feng Jiao, Bonnie BergerNature Reviews. Genetics|April 19, 2013
Computational solutions for omics dataBonnie Berger, Jian Peng, Mona SinghNature Biotechnology|May 8, 2019
Efficient integration of heterogeneous single-cell transcriptomes using ScanoramaBrian Hie, Bryan Bryson, Bonnie BergerJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|September 25, 2007
Predicting and annotating catalytic residues: an information theoretic approachBeckett Sterner, Rohit Singh, Bonnie BergerPlos One|March 2, 2016
Reconstructing Causal Biological Networks through Active LearningHyunghoon Cho, Bonnie Berger, Jian PengProceedings of the National Academy of Sciences of the United States of America|February 12, 2010
Markov random fields reveal an N-terminal double beta-propeller motif as part of a bacterial hybrid two-component sensor systemMatt Menke, Bonnie Berger, Lenore CowenCell Systems|June 25, 2018
Generalizable and Scalable Visualization of Single-Cell Data Using Neural NetworksHyunghoon Cho, Bonnie Berger, Jian PengNature Biotechnology|January 19, 2021
Assessing single-cell transcriptomic variability through density-preserving data visualizationAshwin Narayan, Bonnie Berger, Hyunghoon ChoPacific Symposium on Biocomputing. Pacific Symposium on Biocomputing|November 10, 2007
Probabilistic modeling of systematic errors in two-hybrid experimentsDavid Sontag, Rohit Singh, Bonnie BergerPageof 24