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The Journal of Physical Chemistry. B|January 10, 2023
Allosteric Signaling in PDZ Energetic Networks: Embedding Error AnalysisBenjamin S Cowan, David L Beveridge, Kelly M ThayerInternational Journal of Molecular Sciences|July 29, 2025
Network Theory Analysis of Allosteric Drug-Rescue Mechanisms in the Tumor Suppressor Protein p53 Y220C MutantBenjamin S Cowan, Kelly M ThayerThe Journal of Physical Chemistry. B|May 11, 2017
Molecular Dynamics-Markov State Model of Protein Ligand Binding and Allostery in CRIB-PDZ: Conformational Selection and Induced FitKelly M Thayer, Bharat Lakhani, David L BeveridgeProceedings of the National Academy of Sciences of the United States of America|October 7, 2004
Ion motions in molecular dynamics simulations on DNASergei Y Ponomarev, Kelly M Thayer, David L BeveridgeJournal of Biomolecular Structure & Dynamics|July 3, 2019
Spectral analysis of molecular dynamics simulations on PDZ: MD sectorsBharat Lakhani, Kelly M Thayer, Emily Black, et al.Biophysical Journal|June 17, 2023
Molecular dynamics of mismatch detection-How MutS uses indirect readout to find errors in DNAAbhilash Jayaraj, Kelly M Thayer, David L Beveridge, et al.The Journal of Physical Chemistry. B|January 31, 2017
Evolutionary Covariance Combined with Molecular Dynamics Predicts a Framework for Allostery in the MutS DNA Mismatch Repair ProteinBharat Lakhani, Kelly M Thayer, Manju M Hingorani, et al.The Journal of Physical Chemistry. B|October 17, 2022
Variable Regions of p53 Isoforms Allosterically Hard Code DNA InteractionIsabel Armour-Garb, In Sub Mark Han, Benjamin S Cowan, et al.Biophysical Journal|September 3, 2018
Toward a Universal Structural and Energetic Model for Prokaryotic PromotersAkhilesh Mishra, Priyanka Siwach, Pallavi Misra, et al.Biochemistry and Molecular Biology Education : a Bimonthly Publication of the International Union of Biochemistry and Molecular Biology|February 23, 2016
Structure prediction and analysis of neuraminidase sequence variantsKelly M ThayerPageof 6