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Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing|January 31, 2008
TRELLIS+: an effective approach for indexing genome-scale sequences using suffix treesBenjarath Phoophakdee, Mohammed J ZakiAlgorithms for Molecular Biology : AMB|November 18, 2006
EXMOTIF: efficient structured motif extractionYongqiang Zhang, Mohammed J ZakiAlgorithms for Molecular Biology : AMB|November 23, 2006
SMOTIF: efficient structured pattern and profile motif searchYongqiang Zhang, Mohammed J ZakiComputational Systems Bioinformatics. Computational Systems Bioinformatics Conference|August 1, 2009
Iterative non-sequential protein structural alignmentSaeed Salem, Mohammed J ZakiProceedings. IEEE Computational Systems Bioinformatics Conference|February 2, 2006
PSIST: indexing protein structures using suffix treesFeng Gao, Mohammed J ZakiMethods in Molecular Biology (Clifton, N.J.)|December 14, 2007
Indexing protein structures using suffix treesFeng Gao, Mohammed J ZakiJournal of Healthcare Informatics Research|April 29, 2024
Neural Models for Generating Natural Language Summaries from Temporal Personal Health DataJonathan Harris, Mohammed J ZakiJournal of Bioinformatics and Computational Biology|June 10, 2009
Iterative non-sequential protein structural alignmentSaeed Salem, Mohammed J Zaki, Christopher BystroffAlgorithms for Molecular Biology : AMB|January 6, 2010
FlexSnap: flexible non-sequential protein structure alignmentSaeed Salem, Mohammed J Zaki, Chris BystroffIEEE Transactions on Neural Networks and Learning Systems|April 24, 2023
Toward Subgraph-Guided Knowledge Graph Question Generation With Graph Neural NetworksYu Chen, Lingfei Wu, Mohammed J ZakiPageof 2