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NAR Genomics and Bioinformatics|September 19, 2024
A generalized protein identification method for novel and diverse sequencing technologiesBikash Kumar Bhandari, Nick GoldmanPhilosophical Transactions of the Royal Society of London. Series B, Biological Sciences|October 15, 2008
A model of evolution and structure for multiple sequence alignmentAri Löytynoja, Nick GoldmanJournal of Molecular Evolution|April 17, 2002
Modeling mitochondrial protein evolution using structural informationPietro Liò, Nick GoldmanGenome Biology|March 2, 2012
All Your Base: a fast and accurate probabilistic approach to base callingTim Massingham, Nick GoldmanPlos Genetics|December 6, 2005
Species choice for comparative genomics: being greedy worksFabio Pardi, Nick GoldmanBMC Bioinformatics|June 26, 2012
Error-correcting properties of the SOLiD Exact Call ChemistryTim Massingham, Nick GoldmanGenome Research|April 8, 2017
Short template switch events explain mutation clusters in the human genomeAri Löytynoja, Nick GoldmanMolecular Biology and Evolution|October 16, 2004
Different versions of the Dayhoff rate matrixCarolin Kosiol, Nick GoldmanScience (New York, N.Y.)|June 21, 2008
Phylogeny-aware gap placement prevents errors in sequence alignment and evolutionary analysisAri Löytynoja, Nick GoldmanMolecular Biology and Evolution|November 2, 2002
A novel use of equilibrium frequencies in models of sequence evolutionNick Goldman, Simon WhelanPageof 10