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Bioinformatics (Oxford, England)|April 2, 2020
TwisTranscripT: stochastic simulation of the transcription-supercoiling couplingBilal El Houdaigui, Sam MeyerNucleic Acids Research|June 20, 2019
Bacterial genome architecture shapes global transcriptional regulation by DNA supercoilingBilal El Houdaigui, Raphaël Forquet, Thomas Hindré, et al.Journal of Physics. Condensed Matter : an Institute of Physics Journal|January 8, 2015
Inferring coarse-grain histone-DNA interaction potentials from high-resolution structures of the nucleosomeSam Meyer, Ralf EveraersPlos Computational Biology|September 5, 2014
Torsion-mediated interaction between adjacent genesSam Meyer, Guillaume BeslonArtificial Life|August 9, 2022
A Genome-Wide Evolutionary Simulation of the Transcription-Supercoiling CouplingThéotime Grohens, Sam Meyer, Guillaume BeslonPlos Computational Biology|September 29, 2025
Emergence of supercoiling-mediated regulatory networks through the evolution of bacterial chromosome organizationThéotime Grohens, Sam Meyer, Guillaume BeslonPlos Computational Biology|November 11, 2025
Differential effect of supercoiling on bacterial transcription in topological domainsBoaz Goldberg, Nicolás Yehya, Jie Xiao, et al.Bioinformatics (Oxford, England)|February 15, 2018
ThreaDNA: predicting DNA mechanics' contribution to sequence selectivity of proteins along whole genomesJasmin Cevost, Cédric Vaillant, Sam Meyer, et al.Nucleic Acids Research|July 1, 2022
Quantitative contribution of the spacer length in the supercoiling-sensitivity of bacterial promotersRaphaël Forquet, William Nasser, Sylvie Reverchon, et al.Current Genetics|November 30, 2017
Chromosomal organization of transcription: in a nutshellSam Meyer, Sylvie Reverchon, William Nasser, et al.Pageof 5