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Nature|September 3, 2010
Genome-wide measurement of RNA secondary structure in yeastMichael Kertesz, Yue Wan, Elad Mazor, et al.Nature Biotechnology|July 7, 2014
Revealing long noncoding RNA architecture and functions using domain-specific chromatin isolation by RNA purificationJeffrey J Quinn, Ibrahim A Ilik, Kun Qu, et al.Nature Methods|April 26, 2016
irCLIP platform for efficient characterization of protein-RNA interactionsBrian J Zarnegar, Ryan A Flynn, Ying Shen, et al.NAR Genomics and Bioinformatics|December 3, 2021
PEPATAC: an optimized pipeline for ATAC-seq data analysis with serial alignmentsJason P Smith, M Ryan Corces, Jin Xu, et al.Cell|October 5, 2023
Mitigation of chromosome loss in clinical CRISPR-Cas9-engineered T cellsConnor A Tsuchida, Nadav Brandes, Raymund Bueno, et al.Biorxiv : the Preprint Server for Biology|March 30, 2023
Mitigation of chromosome loss in clinical CRISPR-Cas9-engineered T cellsConnor A Tsuchida, Nadav Brandes, Raymund Bueno, et al.Nature Genetics|July 28, 2025
Massively parallel immunopeptidome by DNA sequencing provides insights into cancer antigen presentationQuanming Shi, Elana P Simon, Cansu Cimen Bozkus, et al.Clinical Cancer Research : an Official Journal of the American Association for Cancer Research|February 12, 2016
CD44+ Cells in Head and Neck Squamous Cell Carcinoma Suppress T-Cell-Mediated Immunity by Selective Constitutive and Inducible Expression of PD-L1Yunqin Lee, June Ho Shin, Michelle Longmire, et al.Biorxiv : the Preprint Server for Biology|May 10, 2023
Transcriptional immune suppression and upregulation of double stranded DNA damage and repair repertoires in ecDNA-containing tumorsMiin S Lin, Se-Young Jo, Jens Luebeck, et al.Nature Communications|April 28, 2023
The AAV capsid can influence the epigenetic marking of rAAV delivered episomal genomes in a species dependent mannerAdriana Gonzalez-Sandoval, Katja Pekrun, Shinnosuke Tsuji, et al.Pageof 42