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Bodhi P Vani

Showing results (1-10 of 10) with videos related to

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Journal of Chemical Information and Modeling|November 20, 2023
Exploring Kinase Asp-Phe-Gly (DFG) Loop Conformational Stability with AlphaFold2-RAVEBodhi P Vani, Akashnathan Aranganathan, Pratyush Tiwary
Arxiv|September 21, 2023
Exploring kinase DFG loop conformational stability with AlphaFold2-RAVEBodhi P Vani, Akashnathan Aranganathan, Pratyush Tiwary
The Journal of Chemical Physics|July 22, 2022
Computing transition path theory quantities with trajectory stratificationBodhi P Vani, Jonathan Weare, Aaron R Dinner
Journal of Chemical Information and Modeling|March 7, 2024
Graph Attention Site Prediction (GrASP): Identifying Druggable Binding Sites Using Graph Neural Networks with AttentionZachary Smith, Michael Strobel, Bodhi P Vani, et al.
Biorxiv : the Preprint Server for Biology|August 7, 2023
Graph Attention Site Prediction (GrASP): Identifying Druggable Binding Sites Using Graph Neural Networks with AttentionZachary Smith, Michael Strobel, Bodhi P Vani, et al.
Journal of Chemical Theory and Computation|May 12, 2023
AlphaFold2-RAVE: From Sequence to Boltzmann RankingBodhi P Vani, Akashnathan Aranganathan, Dedi Wang, et al.
Current Opinion in Structural Biology|February 9, 2025
Modeling Boltzmann-weighted structural ensembles of proteins using artificial intelligence-based methodsAkashnathan Aranganathan, Xinyu Gu, Dedi Wang, et al.
Journal of Chemical Theory and Computation|April 28, 2021
Long-Time-Scale Predictions from Short-Trajectory Data: A Benchmark Analysis of the Trp-Cage MiniproteinJohn Strahan, Adam Antoszewski, Chatipat Lorpaiboon, et al.
Proceedings of the National Academy of Sciences of the United States of America|November 17, 2018
Molecular dynamics simulations of nucleotide release from the circadian clock protein KaiC reveal atomic-resolution functional insightsLu Hong, Bodhi P Vani, Erik H Thiede, et al.
The Journal of Physical Chemistry. B|June 10, 2020
Insulin Dissociates by Diverse Mechanisms of Coupled Unfolding and UnbindingAdam Antoszewski, Chi-Jui Feng, Bodhi P Vani, et al.
Pageof 1

Showing results (1-10 of 10) with videos related to

Sort By:
Pageof 1
Journal of Chemical Information and Modeling|November 20, 2023
Exploring Kinase Asp-Phe-Gly (DFG) Loop Conformational Stability with AlphaFold2-RAVEBodhi P Vani, Akashnathan Aranganathan, Pratyush Tiwary
Arxiv|September 21, 2023
Exploring kinase DFG loop conformational stability with AlphaFold2-RAVEBodhi P Vani, Akashnathan Aranganathan, Pratyush Tiwary
The Journal of Chemical Physics|July 22, 2022
Computing transition path theory quantities with trajectory stratificationBodhi P Vani, Jonathan Weare, Aaron R Dinner
Journal of Chemical Information and Modeling|March 7, 2024
Graph Attention Site Prediction (GrASP): Identifying Druggable Binding Sites Using Graph Neural Networks with AttentionZachary Smith, Michael Strobel, Bodhi P Vani, et al.
Biorxiv : the Preprint Server for Biology|August 7, 2023
Graph Attention Site Prediction (GrASP): Identifying Druggable Binding Sites Using Graph Neural Networks with AttentionZachary Smith, Michael Strobel, Bodhi P Vani, et al.
Journal of Chemical Theory and Computation|May 12, 2023
AlphaFold2-RAVE: From Sequence to Boltzmann RankingBodhi P Vani, Akashnathan Aranganathan, Dedi Wang, et al.
Current Opinion in Structural Biology|February 9, 2025
Modeling Boltzmann-weighted structural ensembles of proteins using artificial intelligence-based methodsAkashnathan Aranganathan, Xinyu Gu, Dedi Wang, et al.
Journal of Chemical Theory and Computation|April 28, 2021
Long-Time-Scale Predictions from Short-Trajectory Data: A Benchmark Analysis of the Trp-Cage MiniproteinJohn Strahan, Adam Antoszewski, Chatipat Lorpaiboon, et al.
Proceedings of the National Academy of Sciences of the United States of America|November 17, 2018
Molecular dynamics simulations of nucleotide release from the circadian clock protein KaiC reveal atomic-resolution functional insightsLu Hong, Bodhi P Vani, Erik H Thiede, et al.
The Journal of Physical Chemistry. B|June 10, 2020
Insulin Dissociates by Diverse Mechanisms of Coupled Unfolding and UnbindingAdam Antoszewski, Chi-Jui Feng, Bodhi P Vani, et al.
Pageof 1