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Methods (San Diego, Calif.)|June 22, 2010
Protein structure prediction: do hydrogen bonding and water-mediated interactions suffice?Vanessa Oklejas, Chenghang Zong, Garegin A Papoian, et al.Proceedings of the National Academy of Sciences of the United States of America|May 30, 1998
The vibrational energy flow transition in organic molecules: theory meets experimentR Bigwood, M Gruebele, D M Leitner, et al.Journal of Molecular Biology|June 9, 2004
The folding and dimerization of HIV-1 protease: evidence for a stable monomer from simulationsYaakov Levy, Amedeo Caflisch, Jose N Onuchic, et al.Proceedings of the National Academy of Sciences of the United States of America|September 29, 1999
Single molecule physics and chemistryC Bai, C Wang, X S Xie, et al.ACS Chemical Neuroscience|December 16, 2017
The Associative Memory, Water Mediated, Structure and Energy Model (AWSEM)-Amylometer: Predicting Amyloid Propensity and Fibril Topology Using an Optimized Folding Landscape ModelMingchen Chen, Nicholas P Schafer, Weihua Zheng, et al.Journal of the American Chemical Society|September 30, 2016
Molecular Mechanism of Facilitated Dissociation of Fis Protein from DNAMin-Yeh Tsai, Bin Zhang, Weihua Zheng, et al.Proceedings of the National Academy of Sciences of the United States of America|October 1, 1992
Protein tertiary structure recognition using optimized Hamiltonians with local interactionsR A Goldstein, Z A Luthey-Schulten, P G WolynesThe Journal of Physical Chemistry. B|April 2, 2008
Variationally determined free energy profiles for structural models of proteins: characteristic temperatures for folding and trappingTongye Shen, Chenghang Zong, John J Portman, et al.The Journal of Physical Chemistry. B|May 8, 2019
Localizing Frustration in Proteins Using All-Atom Energy FunctionsJustin Chen, Nicholas P Schafer, Peter G Wolynes, et al.Biochemistry|April 27, 2005
Scanning malleable transition state ensembles: comparing theory and experiment for folding protein U1ATongye Shen, Christoph P Hofmann, Mikael Oliveberg, et al.Pageof 163