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... IEEE-EMBS International Conference on Biomedical and Health Informatics. IEEE-EMBS International Conference on Biomedical and Health Informatics|May 22, 2018
A General Method for Predicting Amino Acid Residues Experiencing Hydrogen ExchangeBoshen Wang, Alan Perez-Rathke, Renhao Li, et al.
Genome Biology|January 18, 2020
CHROMATIX: computing the functional landscape of many-body chromatin interactions in transcriptionally active loci from deconvolved single cellsAlan Perez-Rathke, Qiu Sun, Boshen Wang, et al.
Briefings in Bioinformatics|June 18, 2023
Structure-based pathogenicity relationship identifier for predicting effects of single missense variants and discovery of higher-order cancer susceptibility clusters of mutationsBoshen Wang, Xue Lei, Wei Tian, et al.
... IEEE-EMBS International Conference on Biomedical and Health Informatics. IEEE-EMBS International Conference on Biomedical and Health Informatics|June 17, 2021
Structure-based Method for Predicting Deleterious Missense SNPsBoshen Wang, Wei Tian, Xue Lei, et al.
Current Opinion in Structural Biology|August 16, 2021
Minimalistic 3D chromatin models: Sparse interactions in single cells drive the chromatin fold and form many-body unitsJie Liang, Alan Perez-Rathke
... IEEE-EMBS International Conference on Biomedical and Health Informatics. IEEE-EMBS International Conference on Biomedical and Health Informatics|March 9, 2022
Predicting Oncogenic Missense MutationsXue Lei, Boshen Wang, Alan Perez-Rathke, et al.
... IEEE-EMBS International Conference on Biomedical and Health Informatics. IEEE-EMBS International Conference on Biomedical and Health Informatics|June 4, 2021
Alterations in Chromatin Folding Patterns in Cancer Variant-Enriched LociAlan Perez-Rathke, Samira Mali, Lin Du, et al.
Nature Communications|January 9, 2021
High-resolution single-cell 3D-models of chromatin ensembles during Drosophila embryogenesisQiu Sun, Alan Perez-Rathke, Daniel M Czajkowsky, et al.
Journal of the American Chemical Society|December 22, 2017
Mechanism of OmpG pH-Dependent Gating from Loop Ensemble and Single Channel StudiesAlan Perez-Rathke, Monifa A Fahie, Christina Chisholm, et al.
Methods in Molecular Biology (Clifton, N.J.)|September 12, 2020
Simulation of pH-Dependent, Loop-Based Membrane Protein Gating Using PretzelAlan Perez-Rathke, Monifa A V Fahie, Christina M Chisholm, et al.
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