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Nature Reviews. Chemistry|April 11, 2025
Kinetics and dynamics of oligonucleotide hybridizationBrennan Ashwood, Andrei Tokmakoff
Journal of the American Chemical Society|October 13, 2021
Determining Sequence-Dependent DNA Oligonucleotide Hybridization and Dehybridization Mechanisms Using Coarse-Grained Molecular Simulation, Markov State Models, and Infrared SpectroscopyMichael S Jones, Brennan Ashwood, Andrei Tokmakoff, et al.
Proceedings of the National Academy of Sciences of the United States of America|March 28, 2023
Disruption of energetic and dynamic base pairing cooperativity in DNA duplexes by an abasic siteBrennan Ashwood, Michael S Jones, Andrew L Ferguson, et al.
The Journal of Physical Chemistry. B|December 25, 2019
5-Carboxylcytosine and Cytosine Protonation Distinctly Alter the Stability and Dehybridization Dynamics of the DNA DuplexBrennan Ashwood, Paul J Sanstead, Qing Dai, et al.
The Journal of Physical Chemistry. B|January 28, 2020
Oxidized Derivatives of 5-Methylcytosine Alter the Stability and Dehybridization Dynamics of Duplex DNAPaul J Sanstead, Brennan Ashwood, Qing Dai, et al.
The Journal of Physical Chemistry. B|September 9, 2020
Temperature-Jump 2D IR Spectroscopy with Intensity-Modulated CW Optical HeatingBrennan Ashwood, Nicholas H C Lewis, Paul J Sanstead, et al.
Biorxiv : the Preprint Server for Biology|August 7, 2023
Molecular insight into how the position of an abasic site and its sequence environment influence DNA duplex stability and dynamicsBrennan Ashwood, Michael S Jones, Yumin Lee, et al.
Biophysical Journal|November 25, 2023
Molecular insight into how the position of an abasic site modifies DNA duplex stability and dynamicsBrennan Ashwood, Michael S Jones, Yumin Lee, et al.
Biorxiv : the Preprint Server for Biology|April 24, 2023
Direct monitoring of the thermodynamics and kinetics of DNA and RNA dinucleotide dehybridization from gaps and overhangsBrennan Ashwood, Michael S Jones, Aleksandar Radakovic, et al.
Biophysical Journal|July 20, 2023
Thermodynamics and kinetics of DNA and RNA dinucleotide hybridization to gaps and overhangsBrennan Ashwood, Michael S Jones, Aleksandar Radakovic, et al.
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