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Bioinformatics (Oxford, England)|November 3, 2017
Mosdepth: quick coverage calculation for genomes and exomesBrent S Pedersen, Aaron R QuinlanGigascience|June 22, 2019
Duphold: scalable, depth-based annotation and curation of high-confidence structural variant callsBrent S Pedersen, Aaron R QuinlanBiorxiv : the Preprint Server for Biology|November 22, 2024
Vcfexpress: flexible, rapid user-expressions to filter and format VCFsBrent S Pedersen, Aaron R QuinlanBioinformatics (Oxford, England)|February 7, 2017
cyvcf2: fast, flexible variant analysis with PythonBrent S Pedersen, Aaron R QuinlanAmerican Journal of Human Genetics|February 14, 2017
Who's Who? Detecting and Resolving Sample Anomalies in Human DNA Sequencing Studies with PeddyBrent S Pedersen, Aaron R QuinlanBioinformatics (Oxford, England)|May 3, 2018
hts-nim: scripting high-performance genomic analysesBrent S Pedersen, Aaron R QuinlanBioinformatics (Oxford, England)|March 4, 2025
Vcfexpress: flexible, rapid user-expressions to filter and format VCFsBrent S Pedersen, Aaron R QuinlanBioinformatics (Oxford, England)|September 28, 2011
Pybedtools: a flexible Python library for manipulating genomic datasets and annotationsRyan K Dale, Brent S Pedersen, Aaron R QuinlanGenome Biology|June 3, 2016
Vcfanno: fast, flexible annotation of genetic variantsBrent S Pedersen, Ryan M Layer, Aaron R QuinlanBioinformatics (Oxford, England)|June 19, 2021
Unfazed: parent-of-origin detection for large and small de novo variantsJonathan R Belyeu, Thomas A Sasani, Brent S Pedersen, et al.Pageof 13