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Journal of Molecular Biology|June 18, 2004
Computational and experimental probes of symmetry mismatches in the Arc repressor-DNA complexShari Spector, Robert T Sauer, Bruce TidorJournal of Chemical Theory and Computation|November 20, 2012
Charge Optimization Theory for Induced-Fit LigandsYang Shen, Michael K Gilson, Bruce TidorProteins|November 21, 2014
Molecular mechanisms and design principles for promiscuous inhibitors to avoid drug resistance: lessons learned from HIV-1 protease inhibitionYang Shen, Mala L Radhakrishnan, Bruce TidorInterface Focus|February 11, 2014
Convergence in parameters and predictions using computational experimental designDavid R Hagen, Jacob K White, Bruce TidorProtein Science : a Publication of the Protein Society|December 4, 2004
A computational method for the analysis and prediction of protein:phosphopeptide-binding sitesBrian A Joughin, Bruce Tidor, Michael B YaffePlos Computational Biology|December 19, 2007
The Per2 negative feedback loop sets the period in the mammalian circadian clock mechanismA Katharina Wilkins, Paul I Barton, Bruce TidorProtein Science : a Publication of the Protein Society|April 2, 2005
Action-at-a-distance interactions enhance protein binding affinityBrian A Joughin, David F Green, Bruce TidorProteins|October 3, 2008
Evaluation of an inverse molecular design algorithm in a model binding siteDavid J Huggins, Michael D Altman, Bruce TidorMolecular Biosystems|January 12, 2007
Biological network design strategies: discovery through dynamic optimizationBambang S Adiwijaya, Paul I Barton, Bruce TidorJournal of Medicinal Chemistry|April 14, 2006
Optimal charges in lead progression: a structure-based neuraminidase case studyKathryn A Armstrong, Bruce Tidor, Alan C ChengPageof 9