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IEEE Transactions on Computational Biology and Bioinformatics|August 14, 2025
Distances Between Extension Spaces of Phylogenetic TreesMaria Alejandra Valdez Cabrera, Amy D Willis
Advances in Applied Mathematics|May 8, 2026
Geometry of the space of phylogenetic trees with non-identical leavesMaría A Valdez-Cabrera, Amy D Willis
Biostatistics (Oxford, England)|October 28, 2023
Analyzing microbial evolution through gene and genome phylogeniesSarah Teichman, Michael D Lee, Amy D Willis
Biorxiv : the Preprint Server for Biology|August 30, 2023
Analyzing microbial evolution through gene and genome phylogeniesSarah Teichman, Michael D Lee, Amy D Willis
Genome Biology|September 29, 2023
happi: a hierarchical approach to pangenomics inferencePauline Trinh, David S Clausen, Amy D Willis
Proceedings of the ... AAAI Conference on Artificial Intelligence. AAAI Conference on Artificial Intelligence|July 14, 2015
Pathway Graphical LassoMaxim Grechkin, Maryam Fazel, Daniela Witten, et al.
Elife|September 11, 2019
Consistent and correctable bias in metagenomic sequencing experimentsMichael R McLaren, Amy D Willis, Benjamin J Callahan
Biometrics|May 28, 2021
A multiview model for relative and absolute microbial abundancesBrian D Williamson, James P Hughes, Amy D Willis
Biorxiv : the Preprint Server for Biology|June 19, 2023
Condition-dependent fitness effects of large synthetic chromosome amplificationsAbigail Keller, Lucy L Gao, Daniela Witten, et al.
Biostatistics (Oxford, England)|December 13, 2022
Inference after latent variable estimation for single-cell RNA sequencing dataAnna Neufeld, Lucy L Gao, Joshua Popp, et al.
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