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Journal of Cheminformatics|April 2, 2023
qHTSWaterfall: 3-dimensional visualization software for quantitative high-throughput screening (qHTS) dataBryan Queme, John C Braisted, Patricia Dranchak, et al.
Biorxiv : the Preprint Server for Biology|April 3, 2026
From SNPs to Pathways: A genome-wide benchmark of annotation discrepancies and their impact on protein- and pathway-level inferenceBryan Queme, Anushya Muruganujan, Dustin Ebert, et al.
Biorxiv : the Preprint Server for Biology|May 18, 2026
SNPWay: streamlined SNP-to-function and pathway over-representation analysisBryan Queme, Ayaan Kakkar, Anushya Muruganujan, et al.
Nucleic Acids Research|May 31, 2022
Annotation Query (AnnoQ): an integrated and interactive platform for large-scale genetic variant annotationZhu Liu, Tremayne Mushayahama, Bryan Queme, et al.
Disease Models & Mechanisms|February 14, 2023
In vivo quantitative high-throughput screening for drug discovery and comparative toxicologyPatricia K Dranchak, Erin Oliphant, Bryan Queme, et al.
Biorxiv : the Preprint Server for Biology|June 29, 2026
Annotation-Based Gene-Peak Links Improve Regulatory Network Prediction of Gene Expression in Human Kidney Multi-OmicsXinran Wang, Kimberly Siegmund, Jesse A Goodrich, et al.
ACS Pharmacology & Translational Science|August 23, 2021
Genome-Edited Coincidence and PMP22-HiBiT Fusion Reporter Cell Lines Enable an Artifact-Suppressive Quantitative High-Throughput Screening Strategy for PMP22 Gene-Dosage Disorder Drug DiscoveryNatalia J Martinez, John C Braisted, Patricia K Dranchak, et al.
The Journal of Biological Chemistry|April 4, 2021
Structure-activity relationship of ipglycermide binding to phosphoglycerate mutasesMareike Wiedmann, Patricia K Dranchak, Mahesh Aitha, et al.
Biorxiv : the Preprint Server for Biology|January 7, 2025
Pathway Polygenic Risk Scores (pPRS) for the Analysis of Gene-environment InteractionW James Gauderman, Yubo Fu, Bryan Queme, et al.
Plos Genetics|August 5, 2025
Pathway polygenic risk scores (pPRS) for the analysis of gene-environment interactionW James Gauderman, Yubo Fu, Bryan Queme, et al.
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