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Proceedings of the National Academy of Sciences of the United States of America|March 27, 2026
Physics-constrained neural ordinary differential equation models to discover and predict microbial community dynamicsJaron Thompson, Bryce M Connors, Victor M Zavala, et al.
Biorxiv : the Preprint Server for Biology|July 17, 2025
Physics-constrained neural ordinary differential equation models to discover and predict microbial community dynamicsJaron Thompson, Bryce M Connors, Victor M Zavala, et al.
Cell Systems|December 13, 2023
Control points for design of taxonomic composition in synthetic human gut communitiesBryce M Connors, Jaron Thompson, Sarah Ertmer, et al.
Nature Communications|June 1, 2021
Design of synthetic human gut microbiome assembly and butyrate productionRyan L Clark, Bryce M Connors, David M Stevenson, et al.
Nature Chemical Biology|July 27, 2026
Designing fiber-gut microbiome interactions with active learningBryce M Connors, Jaron Thompson, Manasi Subhash Gangan, et al.
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