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Frontiers in Immunology|March 9, 2018
Computational Strategies for Dissecting the High-Dimensional Complexity of Adaptive Immune RepertoiresEnkelejda Miho, Alexander Yermanos, Cédric R Weber, et al.Journal of Immunology (Baltimore, Md. : 1950)|September 20, 2017
Learning the High-Dimensional Immunogenomic Features That Predict Public and Private Antibody RepertoiresVictor Greiff, Cédric R Weber, Johannes Palme, et al.Nucleic Acids Research|June 23, 2018
High-throughput antibody engineering in mammalian cells by CRISPR/Cas9-mediated homology-directed mutagenesisDerek M Mason, Cédric R Weber, Cristina Parola, et al.Bioinformatics (Oxford, England)|March 11, 2020
immuneSIM: tunable multi-feature simulation of B- and T-cell receptor repertoires for immunoinformatics benchmarkingCédric R Weber, Rahmad Akbar, Alexander Yermanos, et al.Elife|December 18, 2024
The physiological landscape and specificity of antibody repertoires are consolidated by multiple immunizationsLucia Csepregi, Kenneth Hoehn, Daniel Neumeier, et al.Cell|September 23, 2022
Deep mutational learning predicts ACE2 binding and antibody escape to combinatorial mutations in the SARS-CoV-2 receptor-binding domainJoseph M Taft, Cédric R Weber, Beichen Gao, et al.Nature Biomedical Engineering|March 5, 2025
Deep mutational learning for the selection of therapeutic antibodies resistant to the evolution of Omicron variants of SARS-CoV-2Lester Frei, Beichen Gao, Jiami Han, et al.Nature Biomedical Engineering|April 16, 2021
Optimization of therapeutic antibodies by predicting antigen specificity from antibody sequence via deep learningDerek M Mason, Simon Friedensohn, Cédric R Weber, et al.Frontiers in Immunology|July 29, 2021
A Single-Cell Atlas of Lymphocyte Adaptive Immune Repertoires and Transcriptomes Reveals Age-Related Differences in Convalescent COVID-19 PatientsFlorian Bieberich, Rodrigo Vazquez-Lombardi, Alexander Yermanos, et al.Cell Systems|September 18, 2025
Synthetic coevolution reveals adaptive mutational trajectories of neutralizing antibodies and SARS-CoV-2Roy A Ehling, Mason Minot, Max D Overath, et al.Pageof 2