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Molecular Systems Biology|September 15, 2022
Probing cell identity hierarchies by fate titration and collision during direct reprogrammingBob A Hersbach, David S Fischer, Giacomo Masserdotti, et al.Cytometry. Part a : the Journal of the International Society for Analytical Cytology|July 18, 2019
Evaluation of Deep Learning Strategies for Nucleus Segmentation in Fluorescence ImagesJuan C Caicedo, Jonathan Roth, Allen Goodman, et al.Nature Methods|January 14, 2022
CellRank for directed single-cell fate mappingMarius Lange, Volker Bergen, Michal Klein, et al.Nature Methods|December 24, 2021
Benchmarking atlas-level data integration in single-cell genomicsMalte D Luecken, M Büttner, K Chaichoompu, et al.Nature Neuroscience|April 2, 2013
Live imaging of astrocyte responses to acute injury reveals selective juxtavascular proliferationSophia Bardehle, Martin Krüger, Felix Buggenthin, et al.Nature Biotechnology|April 3, 2019
Inferring population dynamics from single-cell RNA-sequencing time series dataDavid S Fischer, Anna K Fiedler, Eric M Kernfeld, et al.Development (Cambridge, England)|June 5, 2019
Comprehensive single cell mRNA profiling reveals a detailed roadmap for pancreatic endocrinogenesisAimée Bastidas-Ponce, Sophie Tritschler, Leander Dony, et al.Molecular Metabolism|February 14, 2021
CD81 marks immature and dedifferentiated pancreatic β-cellsCiro Salinno, Maren Büttner, Perla Cota, et al.Nature Methods|October 31, 2025
Nicheformer: a foundation model for single-cell and spatial omicsAlejandro Tejada-Lapuerta, Anna C Schaar, Robert Gutgesell, et al.Bioinformatics (Oxford, England)|March 14, 2024
longmixr: a tool for robust clustering of high-dimensional cross-sectional and longitudinal variables of mixed data typesJonas Hagenberg, Monika Budde, Teodora Pandeva, et al.Pageof 52