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Journal of Molecular Biology|January 7, 2000
Investigating the binding specificity of U1A-RNA by computational mutagenesisC M Reyes, P A KollmanJournal of Molecular Biology|April 15, 2000
Structure and thermodynamics of RNA-protein binding: using molecular dynamics and free energy analyses to calculate the free energies of binding and conformational changeC M Reyes, P A KollmanRNA (New York, N.Y.)|February 19, 1999
Molecular dynamics studies of U1A-RNA complexesC M Reyes, P A KollmanNucleic Acids Research|January 11, 2000
Molecular dynamics studies of the HIV-1 TAR and its complex with argininamideR Nifosì, C M Reyes, P A KollmanAnnual Review of Biophysics and Biomolecular Structure|May 8, 2001
Biomolecular simulations: recent developments in force fields, simulations of enzyme catalysis, protein-ligand, protein-protein, and protein-nucleic acid noncovalent interactionsW Wang, O Donini, C M Reyes, et al.Biophysical Journal|May 24, 2001
Molecular dynamics and binding specificity analysis of the bovine immunodeficiency virus BIV Tat-TAR complexC M Reyes, R Nifosì, A D Frankel, et al.Journal of Molecular Biology|October 31, 2000
Free energy calculations on dimer stability of the HIV protease using molecular dynamics and a continuum solvent modelW Wang, P A KollmanProtein Engineering|February 1, 1991
Relative binding free energy calculations of inhibitors to two mutants (Glu46----Ala/Gln) of ribonuclease T1 using molecular dynamics/free energy perturbation approachesS Hirono, P A KollmanProceedings of the National Academy of Sciences of the United States of America|September 15, 1993
What determines the strength of noncovalent association of ligands to proteins in aqueous solution?S Miyamoto, P A KollmanPageof 14