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BMC Bioinformatics
|
January 7, 2021
MicrobeAnnotator: a user-friendly, comprehensive functional annotation pipeline for microbial genomes
Carlos A Ruiz-Perez, Roth E Conrad, Konstantinos T Konstantinidis
Environmental Microbiology Reports
|
July 3, 2019
Prevalence of viral photosynthesis genes along a freshwater to saltwater transect in Southeast USA
Carlos A Ruiz-Perez, Despina Tsementzi, Janet K Hatt, et al.
Frontiers in Bioinformatics
|
October 28, 2022
RecruitPlotEasy: An Advanced Read Recruitment Plot Tool for Assessing Metagenomic Population Abundance and Genetic Diversity
Kenji Gerhardt, Carlos A Ruiz-Perez, Luis M Rodriguez-R, et al.
Systematic and Applied Microbiology
|
March 6, 2021
Description of Candidatus Mesopelagibacter carboxydoxydans and Candidatus Anoxipelagibacter denitrificans: Nitrate-reducing SAR11 genera that dominate mesopelagic and anoxic marine zones
Carlos A Ruiz-Perez, Anthony D Bertagnolli, Despina Tsementzi, et al.
Systematic and Applied Microbiology
|
May 16, 2019
Ecogenomic characterization of widespread, closely-related SAR11 clades of the freshwater genus "Candidatus Fonsibacter" and proposal of Ca. Fonsibacter lacus sp. nov
Despina Tsementzi, Luis M Rodriguez-R, Carlos A Ruiz-Perez, et al.
Nucleic Acids Research
|
April 27, 2025
FastAAI: efficient estimation of genome average amino acid identity and phylum-level relationships using tetramers of universal proteins
Kenji Gerhardt, Carlos A Ruiz-Perez, Luis M Rodriguez-R, et al.
Microbiology Spectrum
|
October 20, 2021
Transcriptomic and rRNA:rDNA Signatures of Environmental versus Enteric Enterococcus faecalis Isolates under Oligotrophic Freshwater Conditions
Brittany Suttner, Minjae Kim, Eric R Johnston, et al.
Frontiers in Veterinary Science
|
September 30, 2024
Proof-of-concept evaluation of next-generation sequencing-based liquid biopsy for non-invasive cancer detection in cats
Carlos A Ruiz-Perez, Prachi Nakashe, Maggie A Marshall, et al.
American Journal of Veterinary Research
|
December 27, 2023
Next-generation sequencing-based liquid biopsy may be used for detection of residual disease and cancer recurrence monitoring in dogs
Angela L McCleary-Wheeler, Patrick C Fiaux, Brian K Flesner, et al.
Journal of the American Veterinary Medical Association
|
February 7, 2024
Clinical validation of a blood-based liquid biopsy test integrating cell-free DNA quantification and next-generation sequencing for cancer screening in dogs
Andi Flory, Carlos A Ruiz-Perez, Ana G Clavere-Graciette, et al.
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Search research articles
Search
Showing results (1-10 of 15) with videos related to
Sort By:
Page
of 2
BMC Bioinformatics
|
January 7, 2021
MicrobeAnnotator: a user-friendly, comprehensive functional annotation pipeline for microbial genomes
Carlos A Ruiz-Perez, Roth E Conrad, Konstantinos T Konstantinidis
Environmental Microbiology Reports
|
July 3, 2019
Prevalence of viral photosynthesis genes along a freshwater to saltwater transect in Southeast USA
Carlos A Ruiz-Perez, Despina Tsementzi, Janet K Hatt, et al.
Frontiers in Bioinformatics
|
October 28, 2022
RecruitPlotEasy: An Advanced Read Recruitment Plot Tool for Assessing Metagenomic Population Abundance and Genetic Diversity
Kenji Gerhardt, Carlos A Ruiz-Perez, Luis M Rodriguez-R, et al.
Systematic and Applied Microbiology
|
March 6, 2021
Description of Candidatus Mesopelagibacter carboxydoxydans and Candidatus Anoxipelagibacter denitrificans: Nitrate-reducing SAR11 genera that dominate mesopelagic and anoxic marine zones
Carlos A Ruiz-Perez, Anthony D Bertagnolli, Despina Tsementzi, et al.
Systematic and Applied Microbiology
|
May 16, 2019
Ecogenomic characterization of widespread, closely-related SAR11 clades of the freshwater genus "Candidatus Fonsibacter" and proposal of Ca. Fonsibacter lacus sp. nov
Despina Tsementzi, Luis M Rodriguez-R, Carlos A Ruiz-Perez, et al.
Nucleic Acids Research
|
April 27, 2025
FastAAI: efficient estimation of genome average amino acid identity and phylum-level relationships using tetramers of universal proteins
Kenji Gerhardt, Carlos A Ruiz-Perez, Luis M Rodriguez-R, et al.
Microbiology Spectrum
|
October 20, 2021
Transcriptomic and rRNA:rDNA Signatures of Environmental versus Enteric Enterococcus faecalis Isolates under Oligotrophic Freshwater Conditions
Brittany Suttner, Minjae Kim, Eric R Johnston, et al.
Frontiers in Veterinary Science
|
September 30, 2024
Proof-of-concept evaluation of next-generation sequencing-based liquid biopsy for non-invasive cancer detection in cats
Carlos A Ruiz-Perez, Prachi Nakashe, Maggie A Marshall, et al.
American Journal of Veterinary Research
|
December 27, 2023
Next-generation sequencing-based liquid biopsy may be used for detection of residual disease and cancer recurrence monitoring in dogs
Angela L McCleary-Wheeler, Patrick C Fiaux, Brian K Flesner, et al.
Journal of the American Veterinary Medical Association
|
February 7, 2024
Clinical validation of a blood-based liquid biopsy test integrating cell-free DNA quantification and next-generation sequencing for cancer screening in dogs
Andi Flory, Carlos A Ruiz-Perez, Ana G Clavere-Graciette, et al.
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