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Plos One|February 23, 2013
Predicting the binding patterns of hub proteins: a study using yeast protein interaction networksCarson M Andorf, Vasant Honavar, Taner Z SenProteins|July 23, 2025
Structural Variability of Pfam Domains Based on Alphafold2 PredictionsElly Poretsky, Carson M Andorf, Taner Z SenPlant Direct|December 21, 2023
PhosBoost: Improved phosphorylation prediction recall using gradient boosting and protein language modelsElly Poretsky, Carson M Andorf, Taner Z SenFrontiers in Artificial Intelligence|June 20, 2022
Predicting Tissue-Specific mRNA and Protein Abundance in Maize: A Machine Learning ApproachKyoung Tak Cho, Taner Z Sen, Carson M AndorfBMC Plant Biology|December 18, 2022
Co-expression pan-network reveals genes involved in complex traits within maize pan-genomeH Busra Cagirici, Carson M Andorf, Taner Z SenG3 (Bethesda, Md.)|March 16, 2024
Harnessing the predicted maize pan-interactome for putative gene function prediction and prioritization of candidate genes for important traitsElly Poretsky, Halise Busra Cagirici, Carson M Andorf, et al.Database : the Journal of Biological Databases and Curation|February 18, 2025
Assessing the performance of generative artificial intelligence in retrieving information against manually curated genetic and genomic dataElly Poretsky, Victoria C Blake, Carson M Andorf, et al.BMC Plant Biology|January 5, 2020
Tissue-specific gene expression and protein abundance patterns are associated with fractionation bias in maizeJesse R Walsh, Margaret R Woodhouse, Carson M Andorf, et al.Database : the Journal of Biological Databases and Curation|April 25, 2018
SNPversity: a web-based tool for visualizing diversityDavid A Schott, Abhinav G Vinnakota, John L Portwood, et al.BMC Bioinformatics|April 21, 2021
FINDER: an automated software package to annotate eukaryotic genes from RNA-Seq data and associated protein sequencesSagnik Banerjee, Priyanka Bhandary, Margaret Woodhouse, et al.Pageof 15