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Inflammatory Bowel Diseases|August 26, 2014
Emerging significance of NLRs in inflammatory bowel diseaseBeckley K Davis, Casandra Philipson, Raquel Hontecillas, et al.
Gut Microbes|March 5, 2016
Systems-wide analyses of mucosal immune responses to Helicobacter pylori at the interface between pathogenicity and symbiosisBarbara Kronsteiner, Josep Bassaganya-Riera, Casandra Philipson, et al.
Infection and Immunity|July 31, 2013
Helicobacter pylori infection in a pig model is dominated by Th1 and cytotoxic CD8+ T cell responsesBarbara Kronsteiner, Josep Bassaganya-Riera, Casandra Philipson, et al.
Plos One|August 1, 2015
Systems Modeling of Interactions between Mucosal Immunity and the Gut Microbiome during Clostridium difficile InfectionAndrew Leber, Monica Viladomiu, Raquel Hontecillas, et al.
Frontiers in Nutrition|February 25, 2016
Modeling-Enabled Systems Nutritional ImmunologyMeghna Verma, Raquel Hontecillas, Vida Abedi, et al.
Bioinformatics (Oxford, England)|May 16, 2019
multiPhATE: bioinformatics pipeline for functional annotation of phage isolatesCarol L Ecale Zhou, Stephanie Malfatti, Jeffrey Kimbrel, et al.
BMC Bioinformatics|September 3, 2015
Multiscale modeling of mucosal immune responsesYongguo Mei, Vida Abedi, Adria Carbo, et al.
Plos One|September 2, 2015
Sensitivity Analysis of an ENteric Immunity SImulator (ENISI)-Based Model of Immune Responses to Helicobacter pylori InfectionMaksudul Alam, Xinwei Deng, Casandra Philipson, et al.
Gut Microbes|December 9, 2014
Zinc deficiency alters host response and pathogen virulence in a mouse model of enteroaggregative Escherichia coli-induced diarrheaDavid T Bolick, Glynis L Kolling, John H Moore, et al.
Bio-Protocol|October 1, 2021
Brief Protocol for EDGE Bioinformatics: Analyzing Microbial and Metagenomic NGS DataCasandra Philipson, Karen Davenport, Logan Voegtly, et al.
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