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AIDS (London, England)|January 25, 2023
Not all clusters are equal: dynamics of molecular HIV-1 clusters in a statewide Rhode Island epidemicVlad Novitsky, Jon Steingrimsson, Mark Howison, et al.AIDS (London, England)|November 11, 2024
Dynamics of clustering rates in the Rhode Island HIV-1 epidemicVlad Novitsky, Jon Steingrimsson, August Guang, et al.Current Biology : CB|February 19, 2021
A genome-scale phylogeny of the kingdom FungiYuanning Li, Jacob L Steenwyk, Ying Chang, et al.Molecular Biology and Evolution|October 22, 2019
Treeio: An R Package for Phylogenetic Tree Input and Output with Richly Annotated and Associated DataLi-Gen Wang, Tommy Tsan-Yuk Lam, Shuangbin Xu, et al.Viruses|March 30, 2023
An Automated Bioinformatics Pipeline Informing Near-Real-Time Public Health Responses to New HIV Diagnoses in a Statewide HIV EpidemicMark Howison, Fizza S Gillani, Vlad Novitsky, et al.Statistical Communications in Infectious Diseases|November 4, 2021
Challenges in evaluating the use of viral sequence data to identify HIV transmission networks for public healthRami Kantor, John P Fulton, Jon Steingrimsson, et al.Scientific Reports|October 30, 2020
Empirical comparison of analytical approaches for identifying molecular HIV-1 clustersVlad Novitsky, Jon A Steingrimsson, Mark Howison, et al.Proceedings. Biological Sciences|September 18, 2009
Assessing the root of bilaterian animals with scalable phylogenomic methodsAndreas Hejnol, Matthias Obst, Alexandros Stamatakis, et al.Nature|March 7, 2008
Broad phylogenomic sampling improves resolution of the animal tree of lifeCasey W Dunn, Andreas Hejnol, David Q Matus, et al.Science (New York, N.Y.)|December 17, 2013
The genome of the ctenophore Mnemiopsis leidyi and its implications for cell type evolutionJoseph F Ryan, Kevin Pang, Christine E Schnitzler, et al.Pageof 8