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Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences|July 22, 2024
Ecological associations distribution modelling of marine plankton at a global scaleMarinna Gaudin, Damien Eveillard, Samuel ChaffronGenome Research|May 12, 2010
A global network of coexisting microbes from environmental and whole-genome sequence dataSamuel Chaffron, Hubert Rehrauer, Jakob Pernthaler, et al.BMC Bioinformatics|January 7, 2021
MiBiOmics: an interactive web application for multi-omics data exploration and integrationJohanna Zoppi, Jean-François Guillaume, Michel Neunlist, et al.Msystems|June 15, 2022
MAGNETO: An Automated Workflow for Genome-Resolved MetagenomicsBenjamin Churcheward, Maxime Millet, Audrey Bihouée, et al.Iscience|July 2, 2024
Community metabolic modeling of host-microbiota interactions through multi-objective optimizationAnna Lambert, Marko Budinich, Maxime Mahé, et al.Proceedings of the National Academy of Sciences of the United States of America|May 29, 2025
Independent transitions to fully planktonic life cycles shaped the global distribution of medusozoans in the epipelagic zoneManon Boosten, Camille Sant, Ophélie Da Silva, et al.Nature Communications|March 29, 2024
Genome-scale community modelling reveals conserved metabolic cross-feedings in epipelagic bacterioplankton communitiesNils Giordano, Marinna Gaudin, Camille Trottier, et al.Msphere|April 22, 2021
Quantitative Assessment of Nucleocytoplasmic Large DNA Virus and Host Interactions Predicted by Co-occurrence AnalysesLingjie Meng, Hisashi Endo, Romain Blanc-Mathieu, et al.Biorxiv : the Preprint Server for Biology|November 24, 2025
Co-occurrence is associated with horizontal gene transfer across marine bacteria independent of phylogenyGavin M Douglas, Nicolas Tromas, Marinna Gaudin, et al.Pageof 6