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RNA (New York, N.Y.)|June 25, 2026
SERIPH: A Two-Step Extraction Protocol for Selective Enrichment of Semi-Extractable RNAsNaoko Fujiwara, Junichi Iwakiri, Chao Zeng, et al.Briefings in Bioinformatics|June 28, 2013
Fighting against uncertainty: an essential issue in bioinformaticsMichiaki HamadaJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|December 6, 2012
Direct updating of an RNA base-pairing probability matrix with marginal probability constraintsMichiaki HamadaMethods in Molecular Biology (Clifton, N.J.)|January 12, 2015
RNA secondary structure prediction from multi-aligned sequencesMichiaki HamadaGene|April 14, 2024
Identification of a novel RNA transcript TISPL upregulated by stressors that stimulate ATF4Yutaro Wakabayashi, Aika Shimono, Yuki Terauchi, et al.BMC Bioinformatics|March 16, 2020
MoAIMS: efficient software for detection of enriched regions of MeRIP-SeqYiqian Zhang, Michiaki HamadaBriefings in Functional Genomics|January 29, 2019
Computational approaches for alternative and transient secondary structures of ribonucleic acidsTsukasa Fukunaga, Michiaki HamadaNAR Genomics and Bioinformatics|November 4, 2021
Clone decomposition based on mutation signatures provides novel insights into mutational processesTaro Matsutani, Michiaki HamadaJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|February 9, 2012
A classification of bioinformatics algorithms from the viewpoint of maximizing expected accuracy (MEA)Michiaki Hamada, Kiyoshi AsaiPageof 66