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Bioinformatics (Oxford, England)|November 17, 2018
pyNVR: investigating factors affecting feature selection from scRNA-seq data for lineage reconstructionBob Chen, Charles A Herring, Ken S Lau
Cellular and Molecular Gastroenterology and Hepatology|May 2, 2018
Single-Cell Computational Strategies for Lineage Reconstruction in Tissue SystemsCharles A Herring, Bob Chen, Eliot T McKinley, et al.
Integrative Biology : Quantitative Biosciences From Nano to Macro|June 5, 2015
Multiscale analysis of the murine intestine for modeling human diseasesJesse Lyons, Charles A Herring, Amrita Banerjee, et al.
Proteins|August 23, 2015
Dynamics and thermodynamic properties of CXCL7 chemokineCharles A Herring, Christopher M Singer, Elena A Ermakova, et al.
Science Signaling|October 13, 2016
Impaired coordination between signaling pathways is revealed in human colorectal cancer using single-cell mass cytometry of archival tissue blocksAlan J Simmons, Cherié R Scurrah, Eliot T McKinley, et al.
Plos Biology|October 23, 2018
Quantitative assessment of cell population diversity in single-cell landscapesQi Liu, Charles A Herring, Quanhu Sheng, et al.
Cell Systems|November 21, 2017
Unsupervised Trajectory Analysis of Single-Cell RNA-Seq and Imaging Data Reveals Alternative Tuft Cell Origins in the GutCharles A Herring, Amrita Banerjee, Eliot T McKinley, et al.
Developmental Cell|January 9, 2019
Neurog3-Independent Methylation Is the Earliest Detectable Mark Distinguishing Pancreatic Progenitor IdentityJing Liu, Amrita Banerjee, Charles A Herring, et al.
Molecular Systems Biology|November 1, 2015
Cytometry-based single-cell analysis of intact epithelial signaling reveals MAPK activation divergent from TNF-α-induced apoptosis in vivoAlan J Simmons, Amrita Banerjee, Eliot T McKinley, et al.
Nature Neuroscience|December 18, 2025
CRISPRi screening in cultured human astrocytes uncovers distal enhancers controlling genes dysregulated in Alzheimer's diseaseNicole F O Green, Gavin J Sutton, Javier Pérez-Burillo, et al.
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