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Biopolymers|February 1, 2011
Nonadditivity in the alpha-helix to coil transitionGregory G Wood, Drew A Clinkenbeard, Donald J JacobsScientific Reports|February 20, 2021
Molecular function recognition by supervised projection pursuit machine learningTyler Grear, Chris Avery, John Patterson, et al.Entropy (Basel, Switzerland)|September 25, 2009
Conformational Entropy of an Ideal Cross-Linking Polymer ChainOleg K Vorov, Dennis R Livesay, Donald J JacobsPhysical Review. E, Statistical, Nonlinear, and Soft Matter Physics|February 3, 2004
Network rigidity at finite temperature: relationships between thermodynamic stability, the nonadditivity of entropy, and cooperativity in molecular systemsDonald J Jacobs, S Dallakyan, G G Wood, et al.Journal of Molecular Biology|February 15, 2011
Kinetics and thermodynamics of the rate-limiting conformational change in the actomyosin V mechanochemical cycleDonald J Jacobs, Darshan Trivedi, Charles David, et al.Biophysical Journal|June 21, 2012
Switch II mutants reveal coupling between the nucleotide- and actin-binding regions in myosin VDarshan V Trivedi, Charles David, Donald J Jacobs, et al.Proteins|November 13, 2008
Unifying mechanical and thermodynamic descriptions across the thioredoxin protein familyJames M Mottonen, Minli Xu, Donald J Jacobs, et al.Algorithms for Molecular Biology : AMB|April 24, 2015
A virtual pebble game to ensemble average graph rigidityLuis C González, Hui Wang, Dennis R Livesay, et al.Methods in Molecular Biology (Clifton, N.J.)|September 25, 2013
Towards comprehensive analysis of protein family quantitative stability-flexibility relationships using homology modelsDeeptak Verma, Jun-Tao Guo, Donald J Jacobs, et al.Journal of Molecular Biology|March 18, 2006
Elucidating quantitative stability/flexibility relationships within thioredoxin and its fragments using a distance constraint modelDonald J Jacobs, Dennis R Livesay, Jeremy Hules, et al.Pageof 6