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Journal of Open Source Software
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September 8, 2022
PyBioPAX: biological pathway exchange in Python
Benjamin M Gyori, Charles Tapley Hoyt
Scientific Data
|
May 29, 2024
The O3 guidelines: open data, open code, and open infrastructure for sustainable curated scientific resources
Charles Tapley Hoyt, Benjamin M Gyori
Bioinformatics (Oxford, England)
|
September 29, 2025
Assembly and reasoning over semantic mappings at scale for biomedical data integration
Charles Tapley Hoyt, Klas Karis, Benjamin M Gyori
Bioinformatics Advances
|
January 26, 2023
Gilda: biomedical entity text normalization with machine-learned disambiguation as a service
Benjamin M Gyori, Charles Tapley Hoyt, Albert Steppi
Bioinformatics (Oxford, England)
|
June 29, 2018
BEL2ABM: agent-based simulation of static models in Biological Expression Language
Michaela Gündel, Charles Tapley Hoyt, Martin Hofmann-Apitius
Bioinformatics (Oxford, England)
|
October 20, 2017
PyBEL: a computational framework for Biological Expression Language
Charles Tapley Hoyt, Andrej Konotopez, Christian Ebeling, et al.
Bioinformatics (Oxford, England)
|
March 14, 2023
Prediction and curation of missing biomedical identifier mappings with Biomappings
Charles Tapley Hoyt, Amelia L Hoyt, Benjamin M Gyori
Database : the Journal of Biological Databases and Curation
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December 22, 2018
BEL Commons: an environment for exploration and analysis of networks encoded in Biological Expression Language
Charles Tapley Hoyt, Daniel Domingo-Fernández, Martin Hofmann-Apitius
Patterns (New York, N.Y.)
|
September 23, 2021
The role of metadata in reproducible computational research
Jeremy Leipzig, Daniel Nüst, Charles Tapley Hoyt, et al.
BMC Bioinformatics
|
October 13, 2019
Quantifying mechanisms in neurodegenerative diseases (NDDs) using candidate mechanism perturbation amplitude (CMPA) algorithm
Reagon Karki, Alpha Tom Kodamullil, Charles Tapley Hoyt, et al.
Page
of 5
Search research articles
Search
Showing results (1-10 of 44) with videos related to
Sort By:
Page
of 5
Journal of Open Source Software
|
September 8, 2022
PyBioPAX: biological pathway exchange in Python
Benjamin M Gyori, Charles Tapley Hoyt
Scientific Data
|
May 29, 2024
The O3 guidelines: open data, open code, and open infrastructure for sustainable curated scientific resources
Charles Tapley Hoyt, Benjamin M Gyori
Bioinformatics (Oxford, England)
|
September 29, 2025
Assembly and reasoning over semantic mappings at scale for biomedical data integration
Charles Tapley Hoyt, Klas Karis, Benjamin M Gyori
Bioinformatics Advances
|
January 26, 2023
Gilda: biomedical entity text normalization with machine-learned disambiguation as a service
Benjamin M Gyori, Charles Tapley Hoyt, Albert Steppi
Bioinformatics (Oxford, England)
|
June 29, 2018
BEL2ABM: agent-based simulation of static models in Biological Expression Language
Michaela Gündel, Charles Tapley Hoyt, Martin Hofmann-Apitius
Bioinformatics (Oxford, England)
|
October 20, 2017
PyBEL: a computational framework for Biological Expression Language
Charles Tapley Hoyt, Andrej Konotopez, Christian Ebeling, et al.
Bioinformatics (Oxford, England)
|
March 14, 2023
Prediction and curation of missing biomedical identifier mappings with Biomappings
Charles Tapley Hoyt, Amelia L Hoyt, Benjamin M Gyori
Database : the Journal of Biological Databases and Curation
|
December 22, 2018
BEL Commons: an environment for exploration and analysis of networks encoded in Biological Expression Language
Charles Tapley Hoyt, Daniel Domingo-Fernández, Martin Hofmann-Apitius
Patterns (New York, N.Y.)
|
September 23, 2021
The role of metadata in reproducible computational research
Jeremy Leipzig, Daniel Nüst, Charles Tapley Hoyt, et al.
BMC Bioinformatics
|
October 13, 2019
Quantifying mechanisms in neurodegenerative diseases (NDDs) using candidate mechanism perturbation amplitude (CMPA) algorithm
Reagon Karki, Alpha Tom Kodamullil, Charles Tapley Hoyt, et al.
Page
of 5