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Structural Dynamics (Melville, N.Y.)|February 14, 2017
Combining multi-mutant and modular thermodynamic cycles to measure energetic coupling networks in enzyme catalysisCharles W Carter, Srinivas Niranj Chandrasekaran, Violetta Weinreb, et al.Journal of Molecular Evolution|November 30, 2019
The Ancient Operational Code is Embedded in the Amino Acid Substitution Matrix and aaRS PhylogeniesJulia A Shore, Barbara R Holland, Jeremy G Sumner, et al.ACS Chemical Biology|March 24, 2016
An Ancestral Tryptophanyl-tRNA Synthetase Precursor Achieves High Catalytic Rate Enhancement without Ordered Ground-State Tertiary StructuresPaul J Sapienza, Li Li, Tishan Williams, et al.Proceedings of the National Academy of Sciences of the United States of America|January 29, 2009
Independent saturation of three TrpRS subsites generates a partially assembled state similar to those observed in molecular simulationsPoramaet Laowanapiban, Maryna Kapustina, Clemens Vonrhein, et al.Molecular Biology and Evolution|April 12, 2013
Statistical evaluation of the Rodin-Ohno hypothesis: sense/antisense coding of ancestral class I and II aminoacyl-tRNA synthetasesSrinivas Niranj Chandrasekaran, Galip Gürkan Yardimci, Ozgün Erdogan, et al.Structure (London, England : 1993)|July 17, 2009
Mg2+-assisted catalysis by B. stearothermophilus TrpRS is promoted by allosteric effectsVioletta Weinreb, Li Li, Cassandra L Campbell, et al.Scientific Reports|March 5, 2020
Author Correction: Octa-repeat domain of the mammalian prion protein mRNA forms stable A-helical hairpin structure rather than G-quadruplexesAndreas Czech, Petr V Konarev, Ingrid Goebel, et al.The Journal of Biological Chemistry|September 25, 2010
Tryptophanyl-tRNA synthetase Urzyme: a model to recapitulate molecular evolution and investigate intramolecular complementationYen Pham, Brian Kuhlman, Glenn L Butterfoss, et al.Scientific Reports|February 23, 2019
Octa-repeat domain of the mammalian prion protein mRNA forms stable A-helical hairpin structure rather than G-quadruplexesAndreas Czech, Petr V Konarev, Ingrid Goebel, et al.The Journal of Biological Chemistry|January 8, 2014
Enhanced amino acid selection in fully evolved tryptophanyl-tRNA synthetase, relative to its urzyme, requires domain motion sensed by the D1 switch, a remote dynamic packing motifVioletta Weinreb, Li Li, Srinivas Niranj Chandrasekaran, et al.Pageof 10