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Journal of Chemical Information and Modeling|September 22, 2015
Iterative Knowledge-Based Scoring Functions Derived from Rigid and Flexible Decoy Structures: Evaluation with the 2013 and 2014 CSAR BenchmarksChengfei Yan, Sam Z Grinter, Benjamin Ryan Merideth, et al.Proteins|November 2, 2016
Performance of MDockPP in CAPRI rounds 28-29 and 31-35 including the prediction of water-mediated interactionsXianjin Xu, Liming Qiu, Chengfei Yan, et al.Journal of Chemical Information and Modeling|May 10, 2013
Automated large-scale file preparation, docking, and scoring: evaluation of ITScore and STScore using the 2012 Community Structure-Activity Resource benchmarkSam Z Grinter, Chengfei Yan, Sheng-You Huang, et al.Molecules (Basel, Switzerland)|July 15, 2014
Challenges, applications, and recent advances of protein-ligand docking in structure-based drug designSam Z Grinter, Xiaoqin ZouJournal of Computational Chemistry|March 14, 2014
A Bayesian statistical approach of improving knowledge-based scoring functions for protein-ligand interactionsSam Z Grinter, Xiaoqin ZouProteins|November 15, 2013
Inclusion of the orientational entropic effect and low-resolution experimental information for protein-protein docking in Critical Assessment of PRedicted Interactions (CAPRI)Sheng-You Huang, Chengfei Yan, Sam Z Grinter, et al.The Journal of Physical Chemistry. B|August 15, 2009
Multiscale generalized born modeling of ligand binding energies for virtual database screeningHao-Yang Liu, Sam Z Grinter, Xiaoqin ZouPhysical Chemistry Chemical Physics : PCCP|August 24, 2010
Scoring functions and their evaluation methods for protein-ligand docking: recent advances and future directionsSheng-You Huang, Sam Z Grinter, Xiaoqin ZouProteins|June 3, 2020
Performance of human and server prediction in CAPRI rounds 38-45Rui Duan, Liming Qiu, Xianjin Xu, et al.Journal of Computational Chemistry|November 4, 2014
Predicting peptide binding sites on protein surfaces by clustering chemical interactionsChengfei Yan, Xiaoqin ZouPageof 34