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Biorxiv : the Preprint Server for Biology|March 18, 2024
Multi-condition and multi-modal temporal profile inference during mouse embryonic developmentRan Zhang, Chengxiang Qiu, Gala Filippova, et al.Genome Research|August 14, 2025
Multicondition and multimodal temporal profile inference during mouse embryonic developmentRan Zhang, Chengxiang Qiu, Galina Filippova, et al.Biorxiv : the Preprint Server for Biology|June 6, 2025
Barcoded monoclonal embryoids are a potential solution to confounding bottlenecks in mosaic organoid screensSamuel G Regalado, Chengxiang Qiu, Jean-Benoît Lalanne, et al.Cell Reports|May 21, 2020
Predicting mRNA Abundance Directly from Genomic Sequence Using Deep Convolutional Neural NetworksVikram Agarwal, Jay ShendureGenome Research|April 3, 2012
Ultra-low-input, tagmentation-based whole-genome bisulfite sequencingAndrew Adey, Jay ShendureMolecular Cell|September 16, 2019
Mechanisms of Interplay between Transcription Factors and the 3D GenomeSeungsoo Kim, Jay ShendureCell|March 17, 2023
A reference cell tree will serve science better than a reference cell atlasSilvia Domcke, Jay ShendurePageof 47