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Plos Computational Biology|September 29, 2017
A metabolic core model elucidates how enhanced utilization of glucose and glutamine, with enhanced glutamine-dependent lactate production, promotes cancer cell growth: The WarburQ effectChiara Damiani, Riccardo Colombo, Daniela Gaglio, et al.
Journal of Biomedical Informatics|September 24, 2018
Integration of transcriptomic data and metabolic networks in cancer samples reveals highly significant prognostic powerAlex Graudenzi, Davide Maspero, Marzia Di Filippo, et al.
International Journal of Pharmaceutics|July 19, 2015
Lipid-based nanoparticles containing cationic derivatives of PTA (1,3,5-triaza-7-phosphaadamantane) as innovative vehicle for Pt complexes: Production, characterization and in vitro studiesRita Cortesi, Chiara Damiani, Laura Ravani, et al.
Computational and Structural Biotechnology Journal|May 7, 2020
MaREA4Galaxy: Metabolic reaction enrichment analysis and visualization of RNA-seq data within GalaxyChiara Damiani, Lorenzo Rovida, Davide Maspero, et al.
Plos Computational Biology|March 1, 2019
Integration of single-cell RNA-seq data into population models to characterize cancer metabolismChiara Damiani, Davide Maspero, Marzia Di Filippo, et al.
Plos Computational Biology|February 7, 2022
INTEGRATE: Model-based multi-omics data integration to characterize multi-level metabolic regulationMarzia Di Filippo, Dario Pescini, Bruno Giovanni Galuzzi, et al.
BMC Bioinformatics|March 18, 2023
LACE 2.0: an interactive R tool for the inference and visualization of longitudinal cancer evolutionGianluca Ascolani, Fabrizio Angaroni, Davide Maspero, et al.
Metabolites|November 27, 2014
Computational strategies for a system-level understanding of metabolismPaolo Cazzaniga, Chiara Damiani, Daniela Besozzi, et al.
Journal of Chemical Information and Modeling|October 30, 2025
Predicting Metalloprotein Redox Potentials with Machine Learning: A Focus on Iron-Sulfur SystemsFrancesca Persico, Bruno G Galuzzi, Miriana Pellegrino, et al.
NPJ Systems Biology and Applications|January 27, 2026
Spatial FBA reveals heterogeneous Warburg niches in renal tumors and lactate consumption in colorectal cancerDavide Maspero, Giovanni Marteletto, Francesco Lapi, et al.
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