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Bioinformatics (Oxford, England)|July 2, 2013
A high-throughput framework to detect synapses in electron microscopy imagesSaket Navlakha, Joseph Suhan, Alison L Barth, et al.Nucleic Acids Research|August 21, 2018
Hercules: a profile HMM-based hybrid error correction algorithm for long readsCan Firtina, Ziv Bar-Joseph, Can Alkan, et al.Nature Communications|April 15, 2022
Membrane marker selection for segmenting single cell spatial proteomics dataMonica T Dayao, Maigan Brusko, Clive Wasserfall, et al.Genome Research|March 12, 2010
Integrating multiple evidence sources to predict transcription factor binding in the human genomeJason Ernst, Heather L Plasterer, Itamar Simon, et al.Genome Research|February 18, 2025
A unified analysis of atlas single-cell dataHao Chen, Nam D Nguyen, Matthew Ruffalo, et al.Biorxiv : the Preprint Server for Biology|October 21, 2020
Reconstructed signaling and regulatory networks identify potential drugs for SARS-CoV-2 infectionJun Ding, Jose Lugo-Martinez, Ye Yuan, et al.Nature Communications|November 15, 2018
A web server for comparative analysis of single-cell RNA-seq dataAmir Alavi, Matthew Ruffalo, Aiyappa Parvangada, et al.Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|January 20, 2021
Supervised Adversarial Alignment of Single-Cell RNA-seq DataSongwei Ge, Haohan Wang, Amir Alavi, et al.Bioinformatics (Oxford, England)|July 25, 2007
Continuous hidden process model for time series expression experimentsYanxin Shi, Michael Klustein, Itamar Simon, et al.ACM-BCB ... ... : the ... ACM Conference on Bioinformatics, Computational Biology and Biomedicine. ACM Conference on Bioinformatics, Computational Biology and Biomedicine|May 28, 2020
Integration of Heterogeneous Experimental Data Improves Global Map of Human Protein ComplexesJose Lugo-Martinez, Ziv Bar-Joseph, Jörn Dengjel, et al.Pageof 386