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BMC Genomics|October 10, 2008
Inferring gene regulatory networks by thermodynamic modelingChieh-Chun Chen, Sheng ZhongBMC Genomics|April 17, 2008
Selection of thermodynamic models for combinatorial control of multiple transcription factors in early differentiation of embryonic stem cellsChieh-Chun Chen, Xin-Guang Zhu, Sheng ZhongPlos Computational Biology|June 23, 2011
Towards an evolutionary model of transcription networksDan Xie, Chieh-Chun Chen, Xin He, et al.Plos One|December 4, 2009
A biophysical model for analysis of transcription factor interaction and binding site arrangement from genome-wide binding dataXin He, Chieh-Chun Chen, Feng Hong, et al.Plos Computational Biology|December 17, 2013
Understanding variation in transcription factor binding by modeling transcription factor genome-epigenome interactionsChieh-Chun Chen, Shu Xiao, Dan Xie, et al.Genome Research|March 12, 2010
Rewirable gene regulatory networks in the preimplantation embryonic development of three mammalian speciesDan Xie, Chieh-Chun Chen, Leon M Ptaszek, et al.Cell|June 12, 2012
Comparative epigenomic annotation of regulatory DNAShu Xiao, Dan Xie, Xiaoyi Cao, et al.BMC Genomics|October 2, 2013
Intronic non-CG DNA hydroxymethylation and alternative mRNA splicing in honey beesPablo Cingolani, Xiaoyi Cao, Radhika S Khetani, et al.Plos Genetics|April 6, 2012
The transcription factor ultraspiracle influences honey bee social behavior and behavior-related gene expressionSeth A Ament, Ying Wang, Chieh-Chun Chen, et al.Cell Reports|March 30, 2017
SMARCAD1 Contributes to the Regulation of Naive Pluripotency by Interacting with Histone CitrullinationShu Xiao, Jia Lu, Bharat Sridhar, et al.Pageof 1