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Biophysical Journal
|
November 30, 2010
Relation between the conformational heterogeneity and reaction cycle of Ras: molecular simulation of Ras
Chigusa Kobayashi, Shinji Saito
Biophysical Journal
|
February 14, 2006
Protein grabs a ligand by extending anchor residues: molecular simulation for Ca2+ binding to calmodulin loop
Chigusa Kobayashi, Shoji Takada
The Journal of Chemical Physics
|
May 3, 2018
Kinetic energy definition in velocity Verlet integration for accurate pressure evaluation
Jaewoon Jung, Chigusa Kobayashi, Yuji Sugita
Journal of Chemical Theory and Computation
|
November 24, 2018
Optimal Temperature Evaluation in Molecular Dynamics Simulations with a Large Time Step
Jaewoon Jung, Chigusa Kobayashi, Yuji Sugita
Journal of Computational Chemistry
|
May 4, 2023
Acceleration of generalized replica exchange with solute tempering simulations of large biological systems on massively parallel supercomputer
Jaewoon Jung, Chigusa Kobayashi, Yuji Sugita
Journal of Chemical Information and Modeling
|
May 6, 2021
Coarse-Grained Modeling of Multiple Pathways in Conformational Transitions of Multi-Domain Proteins
Ai Shinobu, Chigusa Kobayashi, Yasuhiro Matsunaga, et al.
Proceedings of the National Academy of Sciences of the United States of America
|
October 1, 2021
Structural and energetic analysis of metastable intermediate states in the E1P-E2P transition of Ca<sup>2+</sup>-ATPase
Chigusa Kobayashi, Yasuhiro Matsunaga, Jaewoon Jung, et al.
The Journal of Chemical Physics
|
August 6, 2020
A singularity-free torsion angle potential for coarse-grained molecular dynamics simulations
Cheng Tan, Jaewoon Jung, Chigusa Kobayashi, et al.
Biophysics and Physicobiology
|
January 28, 2020
Building a macro-mixing dual-basin Gō model using the Multistate Bennett Acceptance Ratio
Ai Shinobu, Chigusa Kobayashi, Yasuhiro Matsunaga, et al.
Journal of Chemical Theory and Computation
|
September 16, 2016
Graphics Processing Unit Acceleration and Parallelization of GENESIS for Large-Scale Molecular Dynamics Simulations
Jaewoon Jung, Akira Naurse, Chigusa Kobayashi, et al.
Page
of 5
Search research articles
Search
Showing results (1-10 of 47) with videos related to
Sort By:
Page
of 5
Biophysical Journal
|
November 30, 2010
Relation between the conformational heterogeneity and reaction cycle of Ras: molecular simulation of Ras
Chigusa Kobayashi, Shinji Saito
Biophysical Journal
|
February 14, 2006
Protein grabs a ligand by extending anchor residues: molecular simulation for Ca2+ binding to calmodulin loop
Chigusa Kobayashi, Shoji Takada
The Journal of Chemical Physics
|
May 3, 2018
Kinetic energy definition in velocity Verlet integration for accurate pressure evaluation
Jaewoon Jung, Chigusa Kobayashi, Yuji Sugita
Journal of Chemical Theory and Computation
|
November 24, 2018
Optimal Temperature Evaluation in Molecular Dynamics Simulations with a Large Time Step
Jaewoon Jung, Chigusa Kobayashi, Yuji Sugita
Journal of Computational Chemistry
|
May 4, 2023
Acceleration of generalized replica exchange with solute tempering simulations of large biological systems on massively parallel supercomputer
Jaewoon Jung, Chigusa Kobayashi, Yuji Sugita
Journal of Chemical Information and Modeling
|
May 6, 2021
Coarse-Grained Modeling of Multiple Pathways in Conformational Transitions of Multi-Domain Proteins
Ai Shinobu, Chigusa Kobayashi, Yasuhiro Matsunaga, et al.
Proceedings of the National Academy of Sciences of the United States of America
|
October 1, 2021
Structural and energetic analysis of metastable intermediate states in the E1P-E2P transition of Ca<sup>2+</sup>-ATPase
Chigusa Kobayashi, Yasuhiro Matsunaga, Jaewoon Jung, et al.
The Journal of Chemical Physics
|
August 6, 2020
A singularity-free torsion angle potential for coarse-grained molecular dynamics simulations
Cheng Tan, Jaewoon Jung, Chigusa Kobayashi, et al.
Biophysics and Physicobiology
|
January 28, 2020
Building a macro-mixing dual-basin Gō model using the Multistate Bennett Acceptance Ratio
Ai Shinobu, Chigusa Kobayashi, Yasuhiro Matsunaga, et al.
Journal of Chemical Theory and Computation
|
September 16, 2016
Graphics Processing Unit Acceleration and Parallelization of GENESIS for Large-Scale Molecular Dynamics Simulations
Jaewoon Jung, Akira Naurse, Chigusa Kobayashi, et al.
Page
of 5