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Plos Computational Biology|July 31, 2025
Assessing microbiome engraftment extent following fecal microbiota transplant with q2-fmtChloe Herman, Evan Bolyen, Anthony Simard, et al.
F1000Research|October 6, 2025
Facilitating bootstrapped and rarefaction-based microbiome diversity analysis with q2-bootsIsaiah Raspet, Elizabeth Gehret, Chloe Herman, et al.
Plos Computational Biology|November 27, 2023
Facilitating bioinformatics reproducibility with QIIME 2 Provenance ReplayChristopher R Keefe, Matthew R Dillon, Elizabeth Gehret, et al.
Research Square|October 16, 2023
Environmental and Structural Factors Associated with Bacterial Diversity in Household Dust Across the Arizona-Sonora BorderLauren Benton, Nicolas Lopez-Galvez, Chloe Herman, et al.
Gut Microbes|July 3, 2025
A review of engraftment assessments following fecal microbiota transplantChloe Herman, Bridget M Barker, Thais F Bartelli, et al.
Arxiv|April 25, 2024
Assessing Engraftment Following Fecal Microbiota TransplantChloe Herman, Bridget M Barker, Thais F Bartelli, et al.
Scientific Reports|June 4, 2024
Environmental and structural factors associated with bacterial diversity in household dust across the Arizona-Sonora borderLauren D Benton, Nicolas Lopez-Galvez, Chloe Herman, et al.
Microbiology Spectrum|March 6, 2023
Predicting Neurodegenerative Disease Using Prepathology Gut Microbiota Composition: a Longitudinal Study in Mice Modeling Alzheimer's Disease PathologiesEmily M Borsom, Kathryn Conn, Christopher R Keefe, et al.
Biorxiv : the Preprint Server for Biology|February 20, 2025
MOSHPIT: accessible, reproducible metagenome data science on the QIIME 2 frameworkMichal Ziemski, Liz Gehret, Anthony Simard, et al.
Microbiome|August 2, 2023
Oligofructose improves small intestinal lipid-sensing mechanisms via alterations to the small intestinal microbiotaSavanna N Weninger, Chloe Herman, Rachel K Meyer, et al.
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