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BMC Bioinformatics|December 19, 2015
SpliceJumper: a classification-based approach for calling splicing junctions from RNA-seq dataChong Chu, Xin Li, Yufeng WuBMC Genomics|June 7, 2019
GAPPadder: a sensitive approach for closing gaps on draft genomes with short sequence readsChong Chu, Xin Li, Yufeng WuMolecular Ecology Resources|April 19, 2018
CLADES: A classification-based machine learning method for species delimitation from population genetic dataJingwen Pei, Chong Chu, Xin Li, et al.BMC Genomics|October 28, 2018
CircMarker: a fast and accurate algorithm for circular RNA detectionXin Li, Chong Chu, Jingwen Pei, et al.Plos One|March 16, 2016
REPdenovo: Inferring De Novo Repeat Motifs from Short Sequence ReadsChong Chu, Rasmus Nielsen, Yufeng WuBMC Genomics|October 28, 2018
An improved approach for reconstructing consensus repeats from short sequence readsChong Chu, Jingwen Pei, Yufeng WuPlos One|November 26, 2014
GINDEL: accurate genotype calling of insertions and deletions from low coverage population sequence readsChong Chu, Jin Zhang, Yufeng WuBMC Bioinformatics|January 28, 2023
Detecting genomic deletions from high-throughput sequence data with unsupervised learningXin Li, Yufeng WuBMC Genomics|March 7, 2020
Detecting circular RNA from high-throughput sequence data with de Bruijn graphXin Li, Yufeng WuBioinformatics (Oxford, England)|September 11, 2019
Accurate and efficient cell lineage tree inference from noisy single cell data: the maximum likelihood perfect phylogeny approachYufeng WuPageof 1,833