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Proteins|July 17, 2010
Application of biasing-potential replica-exchange simulations for loop modeling and refinement of proteins in explicit solventSrinivasaraghavan Kannan, Martin ZachariasProteins|July 16, 2022
Analysis of amyloidogenic transthyretin mutations using continuum solvent free energy calculationsJulian Hartmann, Martin ZachariasBiophysical Journal|March 12, 2013
Influence of 8-oxoguanosine on the fine structure of DNA studied with biasing-potential replica exchange simulationsMahmut Kara, Martin ZachariasJournal of Chemical Theory and Computation|January 31, 2019
Evaluation of Predicted Protein-Protein Complexes by Binding Free Energy SimulationsTill Siebenmorgen, Martin ZachariasFrontiers in Chemistry|January 22, 2019
γ-Secretase Studied by Atomistic Molecular Dynamics Simulations: Global Dynamics, Enzyme Activation, Water Distribution and Lipid BindingManuel Hitzenberger, Martin ZachariasScientific Reports|January 28, 2017
Both DNA global deformation and repair enzyme contacts mediate flipping of thymine dimer damageAlexander Knips, Martin ZachariasBiophysical Journal|July 31, 2007
Folding of a DNA hairpin loop structure in explicit solvent using replica-exchange molecular dynamics simulationsSrinivasaraghavan Kannan, Martin ZachariasBiophysical Journal|June 8, 2017
Origin of Ion Specificity of Telomeric DNA G-Quadruplexes Investigated by Free-Energy SimulationsTill Siebenmorgen, Martin ZachariasInternational Journal of Molecular Sciences|April 29, 2009
Folding of Trp-cage mini protein using temperature and biasing potential replica-exchange molecular dynamics simulationsSrinivasaraghavan Kannan, Martin ZachariasNucleic Acids Research|July 5, 2011
Role of the closing base pair for d(GCA) hairpin stability: free energy analysis and folding simulationsSrinivasaraghavan Kannan, Martin ZachariasPageof 34