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Proceedings of the National Academy of Sciences of the United States of America|January 14, 2005
Profiling the humoral immune response to infection by using proteome microarrays: high-throughput vaccine and diagnostic antigen discoveryD Huw Davies, Xiaowu Liang, Jenny E Hernandez, et al.Bioinformatics (Oxford, England)|July 1, 2008
BLASTing small molecules--statistics and extreme statistics of chemical similarity scoresPierre Baldi, Ryan W BenzProtein Engineering, Design & Selection : PEDS|December 17, 2008
COBEpro: a novel system for predicting continuous B-cell epitopesMichael J Sweredoski, Pierre BaldiNeural Networks : the Official Journal of the International Neural Network Society|September 15, 2005
On the relationship between deterministic and probabilistic directed Graphical models: from Bayesian networks to recursive neural networksPierre Baldi, Michal Rosen-ZviJournal of Chemical Information and Modeling|March 1, 2007
Bounds and algorithms for fast exact searches of chemical fingerprints in linear and sublinear timeS Joshua Swamidass, Pierre BaldiJournal of Chemical Information and Modeling|April 21, 2007
Mathematical correction for fingerprint similarity measures to improve chemical retrievalS Joshua Swamidass, Pierre BaldiJournal of Chemical Information and Modeling|September 2, 2009
No electron left behind: a rule-based expert system to predict chemical reactions and reaction mechanismsJonathan H Chen, Pierre BaldiNucleic Acids Research|May 19, 2012
Cyber-T web server: differential analysis of high-throughput dataMatthew A Kayala, Pierre BaldiBioinformatics (Oxford, England)|September 25, 2020
Fold recognition by scoring protein maps using the congruence coefficientPietro Di Lena, Pierre BaldiJournal of Chemical Information and Modeling|July 16, 2009
An intersection inequality sharper than the tanimoto triangle inequality for efficiently searching large databasesPierre Baldi, Daniel S HirschbergPageof 28