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Proceedings of the National Academy of Sciences of the United States of America|March 23, 2017
Comprehensive and quantitative mapping of RNA-protein interactions across a transcribed eukaryotic genomeRichard She, Anupam K Chakravarty, Curtis J Layton, et al.Molecular Biology and Evolution|January 22, 2021
The Hunt for Ancient Prions: Archaeal Prion-Like Domains Form Amyloid-Based Epigenetic ElementsTomasz Zajkowski, Michael D Lee, Shamba S Mondal, et al.Biotechnology for Biofuels|November 3, 2021
Massive QTL analysis identifies pleiotropic genetic determinants for stress resistance, aroma formation, and ethanol, glycerol and isobutanol production in Saccharomyces cerevisiaePing-Wei Ho, Supinya Piampongsant, Brigida Gallone, et al.Research Square|December 8, 2025
Stress-driven emergence of heritable non-genetic drug resistanceJinglin L Xie, Sifei Yin, Theodore S Yang, et al.Cell|August 30, 2014
Cross-kingdom chemical communication drives a heritable, mutually beneficial prion-based transformation of metabolismDaniel F Jarosz, Jessica C S Brown, Gordon A Walker, et al.Cancer Discovery|July 19, 2022
Biomolecular Condensation: A New Phase in Cancer ResearchAnupam K Chakravarty, Daniel J McGrail, Thomas M Lozanoski, et al.Science Advances|December 8, 2023
In vivo protein turnover rates in varying oxygen tensions nominate MYBBP1A as a mediator of the hyperoxia responseXuewen Chen, Augustinus G Haribowo, Alan H Baik, et al.Cell Reports|May 29, 2024
Identification of protein aggregates in the aging vertebrate brain with prion-like and phase-separation propertiesItamar Harel, Yiwen R Chen, Inbal Ziv, et al.Biorxiv : the Preprint Server for Biology|April 10, 2026
eSIG-Net: Accurate prediction of single-mutation induced perturbations on protein interactions using a language modelXingxin Pan, Aditya Shrawat, Sidharth Raghavan, et al.Nature Methods|April 29, 2026
eSIG-Net: an interaction language model that decodes the protein code of single mutationsXingxin Pan, Aditya Shrawat, Sidharth Raghavan, et al.Pageof 8