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Computational and Structural Biotechnology Journal|April 20, 2023
A novel method to identify and characterize personalized functional driver lncRNAs in cancer samplesXuan Zheng, Feng Li, Hongying Zhao, et al.Oncotarget|October 17, 2015
Subpathway-GMir: identifying miRNA-mediated metabolic subpathways by integrating condition-specific genes, microRNAs, and pathway topologiesLi Feng, Yanjun Xu, Yunpeng Zhang, et al.Scientific Reports|November 25, 2015
Global Prioritization of Disease Candidate Metabolites Based on a Multi-omics Composite NetworkQianlan Yao, Yanjun Xu, Haixiu Yang, et al.Scientific Reports|August 13, 2015
ESEA: Discovering the Dysregulated Pathways based on Edge Set Enrichment AnalysisJunwei Han, Xinrui Shi, Yunpeng Zhang, et al.International Journal of Biological Macromolecules|May 11, 2025
Multi-omics analysis reveals insights into hypoxia-tolerant rice growth and identifies the 1-Cys peroxiredoxin B-like proteaseJin Chen, Qiuping Li, Junjun Guo, et al.Journal of Biomedical Informatics|February 25, 2014
The detection of risk pathways, regulated by miRNAs, via the integration of sample-matched miRNA-mRNA profiles and pathway structureJing Li, Chunquan Li, Junwei Han, et al.Scientific Reports|April 21, 2017
LncRNAs2Pathways: Identifying the pathways influenced by a set of lncRNAs of interest based on a global network propagation methodJunwei Han, Siyao Liu, Zeguo Sun, et al.Briefings in Bioinformatics|July 31, 2024
Identifying cell type-specific transcription factor-mediated activity immune modules reveal implications for immunotherapy and molecular classification of pan-cancerFeng Li, Jingwen Wang, Mengyue Li, et al.Briefings in Bioinformatics|July 27, 2026
Screening of cell-type-specific meta-programs for drug repurposing in Alzheimer's diseaseChunlong Zhang, Yuxi Zhang, Zhiyi Wu, et al.Journal of the Royal Society, Interface|January 1, 2015
A novel dysregulated pathway-identification analysis based on global influence of within-pathway effects and crosstalk between pathwaysJunwei Han, Chunquan Li, Haixiu Yang, et al.Pageof 17