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STAR Protocols|September 18, 2024
Protocol to infer and analyze miRNA sponge modules in heterogeneous data using miRSM 2.0Junpeng Zhang, Xuemei Wei, Chunwen Zhao, et al.
Methods in Molecular Biology (Clifton, N.J.)|December 20, 2024
Modeling ncRNA Synergistic Regulation in CancerJunpeng Zhang, Chenchen Xiong, Xuemei Wei, et al.
BMC Bioinformatics|September 28, 2024
Modelling cell type-specific lncRNA regulatory network in autism with CycleChenchen Xiong, Mingfang Zhang, Haolin Yang, et al.
Plos Computational Biology|October 9, 2023
Pan-cancer characterization of ncRNA synergistic competition uncovers potential carcinogenic biomarkersJunpeng Zhang, Lin Liu, Xuemei Wei, et al.
BMC Bioinformatics|May 12, 2019
miRspongeR: an R/Bioconductor package for the identification and analysis of miRNA sponge interaction networks and modulesJunpeng Zhang, Lin Liu, Taosheng Xu, et al.
BMC Biology|September 28, 2024
Scanning sample-specific miRNA regulation from bulk and single-cell RNA-sequencing dataJunpeng Zhang, Lin Liu, Xuemei Wei, et al.
Bioinformatics Advances|January 26, 2023
miRspongeR 2.0: an enhanced R package for exploring miRNA sponge regulationJunpeng Zhang, Lin Liu, Wu Zhang, et al.
BMC Plant Biology|February 8, 2024
The PPO family in Nicotiana tabacum is an important regulator to participate in pollinationXuemei Wei, Keliang Tao, Zhengmei Liu, et al.
RNA Biology|April 6, 2021
miRSM: an R package to infer and analyse miRNA sponge modules in heterogeneous dataJunpeng Zhang, Lin Liu, Taosheng Xu, et al.
BMC Bioinformatics|December 3, 2021
Exploring cell-specific miRNA regulation with single-cell miRNA-mRNA co-sequencing dataJunpeng Zhang, Lin Liu, Taosheng Xu, et al.
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