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Biochemical Society Transactions|May 8, 2020
Using automated reasoning to explore the metabolism of unconventional organisms: a first step to explore host-microbial interactionsClémence Frioux, Simon M Dittami, Anne Siegel
Bioinformatics (Oxford, England)|November 14, 2018
Scalable and exhaustive screening of metabolic functions carried out by microbial consortiaClémence Frioux, Enora Fremy, Camille Trottier, et al.
Computational and Structural Biotechnology Journal|July 17, 2020
From bag-of-genes to bag-of-genomes: metabolic modelling of communities in the era of metagenome-assembled genomesClémence Frioux, Dipali Singh, Tamas Korcsmaros, et al.
Bioinformatics (Oxford, England)|June 6, 2025
Mapler: a pipeline for assessing assembly quality in taxonomically rich metagenomes sequenced with HiFi readsNicolas Maurice, Claire Lemaitre, Riccardo Vicedomini, et al.
Nucleic Acids Research|December 29, 2025
Detecting signatures underlying the composition of biological dataAnthony Duncan, Wing Koon, Katarzyna Sidorczuk, et al.
Bioinformatics (Oxford, England)|March 31, 2025
Seed2LP: seed inference in metabolic networks for reverse ecology applicationsChabname Ghassemi Nedjad, Mathieu Bolteau, Lucas Bourneuf, et al.
Biochimica Et Biophysica Acta|December 10, 2013
Crystal structure and biochemical characterization of a manganese superoxide dismutase from Chaetomium thermophilumTeemu Haikarainen, Clémence Frioux, Li-Qing Zhnag, et al.
Elife|December 29, 2020
Metage2Metabo, microbiota-scale metabolic complementarity for the identification of key speciesArnaud Belcour, Clémence Frioux, Méziane Aite, et al.
Metabolic Engineering|March 9, 2024
Revealing the dynamics and mechanisms of bacterial interactions in cheese production with metabolic modellingMaxime Lecomte, Wenfan Cao, Julie Aubert, et al.
Environmental Microbiology|November 13, 2020
Metagenomic assessment of the global diversity and distribution of bacteria and fungiMohammad Bahram, Tarquin Netherway, Clémence Frioux, et al.
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