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Briefings in Bioinformatics|January 30, 2016
Computational methods to identify metabolic sub-networks based on metabolomic profilesClément Frainay, Fabien JourdanMetabolomics : Official Journal of the Metabolomic Society|September 9, 2025
Simulated metabolic profiles reveal biases in pathway analysis methodsJuliette Cooke, Cecilia Wieder, Nathalie Poupin, et al.Metabolites|September 19, 2018
Mind the Gap: Mapping Mass Spectral Databases in Genome-Scale Metabolic Networks Reveals Poorly Covered AreasClément Frainay, Emma L Schymanski, Steffen Neumann, et al.Bioinformatics (Oxford, England)|October 3, 2017
MetExploreViz: web component for interactive metabolic network visualizationMaxime Chazalviel, Clément Frainay, Nathalie Poupin, et al.Frontiers in Molecular Biosciences|February 25, 2016
A Computational Solution to Automatically Map Metabolite Libraries in the Context of Genome Scale Metabolic NetworksBenjamin Merlet, Nils Paulhe, Florence Vinson, et al.Gigascience|September 15, 2023
Suggesting disease associations for overlooked metabolites using literature from metabolic neighborsMaxime Delmas, Olivier Filangi, Christophe Duperier, et al.Plos Computational Biology|February 22, 2024
Genome scale metabolic network modelling for metabolic profile predictionsJuliette Cooke, Maxime Delmas, Cecilia Wieder, et al.Analytical Chemistry|November 20, 2023
APEX: an Annotation Propagation Workflow through Multiple Experimental Networks to Improve the Annotation of New Metabolite Classes in Caenorhabditis elegansLiesa Salzer, Elva María Novoa-Del-Toro, Clément Frainay, et al.BMC Bioinformatics|July 11, 2024
A strategy to detect metabolic changes induced by exposure to chemicals from large sets of condition-specific metabolic models computed with enumeration techniquesLouison Fresnais, Olivier Perin, Anne Riu, et al.Archives of Toxicology|June 28, 2018
Integrated transcriptomics and metabolomics reveal signatures of lipid metabolism dysregulation in HepaRG liver cells exposed to PCB 126Robin Mesnage, Martina Biserni, Sucharitha Balu, et al.Pageof 6