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Biorxiv : the Preprint Server for Biology|March 10, 2025
Contrastive Learning Enables Epitope Overlap Predictions for Targeted Antibody DiscoveryClinton M Holt, Alexis K Janke, Parastoo Amlashi, et al.Patterns (New York, N.Y.)|February 23, 2026
Contrastive learning enables epitope overlap predictions for targeted antibody discoveryClinton M Holt, Alexis K Janke, Parastoo Amlashi, et al.Precision Nanomedicine|November 28, 2019
SPECIFIC MOLECULAR RECOGNITION AS A STRATEGY TO DELINEATE TUMOR MARGIN USING TOPICALLY APPLIED FLUORESCENCE EMBEDDED NANOPARTICLESShawn Barton, Bo Li, Michael Siuta, et al.Journal of Immunology (Baltimore, Md. : 1950)|March 15, 2024
Potent HPIV3-neutralizing IGHV5-51 Antibodies Identified from Multiple Individuals Show L Chain and CDRH3 PromiscuityAlexandra A Abu-Shmais, Rose J Miller, Alexis K Janke, et al.Cell Reports. Medicine|November 7, 2023
SARS-CoV-2 antibodies from children exhibit broad neutralization and belong to adult public clonotypesSteven C Wall, Naveenchandra Suryadevara, Changil Kim, et al.Biorxiv : the Preprint Server for Biology|March 3, 2025
Generation of antigen-specific paired chain antibody sequences using large language modelsPerry T Wasdin, Nicole V Johnson, Alexis K Janke, et al.Cell Reports|September 30, 2021
Potent neutralization of SARS-CoV-2 variants of concern by an antibody with an uncommon genetic signature and structural mode of spike recognitionKevin J Kramer, Nicole V Johnson, Andrea R Shiakolas, et al.Cell|November 5, 2025
Generation of antigen-specific paired-chain antibodies using large language modelsPerry T Wasdin, Nicole V Johnson, Alexis K Janke, et al.Cell Reports. Medicine|May 31, 2021
Cross-reactive coronavirus antibodies with diverse epitope specificities and Fc effector functionsAndrea R Shiakolas, Kevin J Kramer, Daniel Wrapp, et al.Biorxiv : the Preprint Server for Biology|January 5, 2021
Cross-reactive coronavirus antibodies with diverse epitope specificities and extra-neutralization functionsAndrea R Shiakolas, Kevin J Kramer, Daniel Wrapp, et al.Pageof 2