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Computational Biology and Chemistry|December 6, 2024
Machine learning approaches for predicting craniofacial anomalies with graph neural networksColten Alme, Harun Pirim, Yusuf AkbulutInternational Journal of Information Technology : an Official Journal of Bharati Vidyapeeth'S Institute of Computer Applications and Management|August 18, 2025
Harnessing deep learning for SNP-based disease prediction in genomicsColten Alme, Harun Pirim, M Mishkatur RahmanSleep & Breathing = Schlaf & Atmung|February 7, 2026
Predicting the Apnea-Hypopnea index for the diagnosis of obstructive sleep apnea with cardiovascular and cancer comorbidity using wearable sleep-tracking devicesHon Keung Tony Ng, Uyen Nguyen, Yusuf Akbulut, et al.International Journal of Genomics|October 18, 2018
Gene Coexpression Network Comparison via Persistent HomologyAli Nabi Duman, Harun PirimComputers in Biology and Medicine|April 28, 2015
Clustering high throughput biological data with B-MST, a minimum spanning tree based heuristicHarun Pirim, Burak Ekşioğlu, Andy D PerkinsComputers & Operations Research|November 13, 2012
Clustering of High Throughput Gene Expression DataHarun Pirim, Burak Ekşioğlu, Andy Perkins, et al.Brain Sciences|June 29, 2019
Uncovering Dynamic Brain Reconfiguration in MEG Working Memory <i>n</i>-Back Task Using Topological Data AnalysisAli Nabi Duman, Ahmet Emin Tatar, Harun PirimApplied Network Science|February 27, 2023
Integrated twitter analysis to distinguish systems thinkers at various levels: a case study of COVID-19Harun Pirim, Morteza Nagahi, Oumaima Larif, et al.Iscience|October 16, 2025
Multilayer GNN for predictive maintenance and clustering in power gridsMuhammad Kazim, Harun Pirim, Chau Le, et al.Pageof 1