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Biorxiv : the Preprint Server for Biology|November 19, 2025
Qimai: a multi-agent framework for zero-shot DNA-protein interaction predictionCong Liu, Mina Yao, Wei Wang
Nucleic Acids Research|June 22, 2024
Differential impact of quiescent non-coding loci on chromatin entropyPeiyao Wu, Mina Yao, Wei Wang
NAR Genomics and Bioinformatics|November 11, 2021
Taiji-reprogram: a framework to uncover cell-type specific regulators and predict cellular reprogramming cocktailsJun Wang, Cong Liu, Yue Chen, et al.
Briefings in Bioinformatics|July 25, 2024
TUnA: an uncertainty-aware transformer model for sequence-based protein-protein interaction predictionYoung Su Ko, Jonathan Parkinson, Cong Liu, et al.
Drug Delivery and Translational Research|December 24, 2022
Short-chain fatty acid-mediated epigenetic modulation of inflammatory T cells in vitroDavid A McBride, Nicholas C Dorn, Mina Yao, et al.
Plos Computational Biology|October 2, 2023
Predicting regional somatic mutation rates using DNA motifsCong Liu, Zengmiao Wang, Jun Wang, et al.
Journal of Physics. Condensed Matter : an Institute of Physics Journal|July 7, 2023
Two-dimensional Dirac phonons without/with inversion symmetryChenyang Wang, Wei-Wang Yu, Ying Liu, et al.
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