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Nature Communications|August 10, 2023
Genomic epidemiology offers high resolution estimates of serial intervals for COVID-19Jessica E Stockdale, Kurnia Susvitasari, Paul Tupper, et al.
Plos Computational Biology|December 3, 2020
Quantifying the impact of COVID-19 control measures using a Bayesian model of physical distancingSean C Anderson, Andrew M Edwards, Madi Yerlanov, et al.
Lancet Regional Health. Americas|January 16, 2026
Mycobacterium tuberculosis transmission dynamics within prisons: a population-based genomic studyKatharine S Walter, Everton Ferreira Lemos, Ana Paula Cavalcante Aires Alves, et al.
The Lancet. Infectious Diseases|April 24, 2018
Internal migration and transmission dynamics of tuberculosis in Shanghai, China: an epidemiological, spatial, genomic analysisChongguang Yang, Liping Lu, Joshua L Warren, et al.
Clinical Infectious Diseases : an Official Publication of the Infectious Diseases Society of America|July 4, 2021
Long-Term Persistence of Spike Protein Antibody and Predictive Modeling of Antibody Dynamics After Infection With Severe Acute Respiratory Syndrome Coronavirus 2Louis Grandjean, Anja Saso, Arturo Torres Ortiz, et al.
Plos One|December 28, 2017
Convergent evolution and topologically disruptive polymorphisms among multidrug-resistant tuberculosis in PeruLouis Grandjean, Robert H Gilman, Tomatada Iwamoto, et al.
Biorxiv : the Preprint Server for Biology|July 15, 2024
e3SIM: epidemiological-ecological-evolutionary simulation framework for genomic epidemiologyPeiyu Xu, Shenni Liang, Andrew Hahn, et al.
Methods in Ecology and Evolution|April 9, 2026
e3SIM: Epidemiological-ecological-evolutionary simulation framework for genomic epidemiologyPeiyu Xu, Shenni Liang, Andrew Hahn, et al.
Canadian Journal of Public Health = Revue Canadienne De Sante Publique|July 26, 2024
Canada's provincial COVID-19 pandemic modelling efforts: A review of mathematical models and their impacts on the responsesYiqing Xia, Jorge Luis Flores Anato, Caroline Colijn, et al.
The Lancet. Microbe|June 11, 2026
Comparison of phylogenetic metrics of transmission between symptomatic and asymptomatic tuberculosis in individuals who were incarcerated in Brazil in 2008-24: a retrospective genomic epidemiology studyKesia Esther da Silva, Paulo César Pereira Dos Santos, Daniel Henrique Tsuha, et al.
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